Gossypium raimondii: 105791879
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Entry
105791879 CDS
T04129
Name
(RefSeq) 4-coumarate--CoA ligase-like 6 isoform X1
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
gra
Gossypium raimondii
Pathway
gra00130
Ubiquinone and other terpenoid-quinone biosynthesis
gra00940
Phenylpropanoid biosynthesis
gra01100
Metabolic pathways
gra01110
Biosynthesis of secondary metabolites
Module
gra_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
gra_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
105791879
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
105791879
Enzymes [BR:
gra01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
105791879
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Motif
Pfam:
AMP-binding
AMP-binding_C
GyrB_insert
Motif
Other DBs
NCBI-GeneID:
105791879
NCBI-ProteinID:
XP_012475609
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Position
8:49481301..49484720
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AA seq
593 aa
AA seq
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MATSLNFFPQTSEPKTTHLPDWYSPETRIYSSTYSSISLPTDPFLDIVSFIFSHQHDGVT
ALIDSSSGYSISYSKLLPLVQSMASGLHHLGVSQGDVVLLLLPNSVNFPIIFFSVLYLGA
VVTTMNPLSNMMEVKKQIVDCGVRFAFTLLENVDKLQKLGVHAIGVPENMDLDSEKTGFL
SFRKLIGGQFGKAPRPVIRQQDTAAIMYSSGTTGVSKGVVLTHGNFIATTELFVRFEASQ
YEYSSSKNVYLAVLPMFHIYGLSLFVVGLLSLGSSIVIMRRFDASELVKVIDDYGVTHFP
VVPPILTTLTMRAKHVCENSLQSLKQVSCGAAPLSGKTIEDFVQALPHVDFIQGYGMTES
TAVGTRGFNNEKHHNYSSIGLLAPNMQAKVVDWNSGSSLPPGFHGELWLRGPAIMQRYIN
NVEATNMTIDKDGWLRTGDIVCFDGEGYLYLSDRLKEIIKYKGYQIAPADLEAVLISHPE
ILDAAVTSAADEVCGEIPVAFVVRRHGSTLTKGAVIDFVANQYISISAAKETLNGLLKFE
NFVQHTQQQKPIKSLSLKVSAIIDGSHFSMNFDRSPFLMWFSDVLNLFIGQKW
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaagcttgaacttcttcccccagacctcagaacccaaaactactcatcttcct
gactggtattcaccagaaacaagaatctattccagcacgtattcctctatatctcttcca
actgatccatttcttgacattgtttccttcattttctctcaccaacatgatggggttact
gctttgattgattcctcatctgggtattcaatatcttactcaaagctattacctttggtc
caatcaatggcctcaggtctccaccaccttggtgtttcccaaggggatgtggtcttgctt
ttgttgccaaattctgtcaatttccccattattttcttcagcgttttatatttgggtgca
gttgttaccaccatgaatccactaagtaatatgatggaggtcaagaaacaaattgttgat
tgtggtgtgcgttttgcatttactctacttgaaaatgttgacaaacttcagaaattgggt
gttcatgcaattggggtaccagaaaacatggacctggattcagaaaagactggtttttta
tcttttcgtaagcttattgggggccaatttggtaaggcgccaaggcctgtgattaggcag
caggacacggccgcaataatgtattcatcaggtactacaggcgttagcaagggggttgta
ttaacacatgggaattttatagcaacgactgagctttttgtaagatttgaagcttcacag
tacgaatattcaagttcaaagaatgtgtatttagctgttcttccaatgttccatatatat
ggattatcacttttcgtggttggattattgtcattgggttctagcattgttatcatgagg
agatttgatgccagtgaactggtgaaagtaattgatgactatggagttactcactttcca
gttgttccacctatactgacaacattgacaatgagagccaagcatgtttgtgaaaatagc
ttgcagagtttaaaacaggtttcctgtggtgctgctcctttgagcgggaaaaccatagag
gactttgttcaggctcttcctcatgttgatttcattcagggctatggcatgactgaatca
actgcagtaggaactcgtggcttcaacaatgaaaaacatcataattattcttcaatagga
cttctagcaccaaacatgcaagctaaagtggtagattggaattctggttcttctttgcct
cctggctttcatggcgagctttggctaagaggacctgcaattatgcaacgatacataaat
aatgttgaggccaccaatatgacaattgataaagatggctggctacgtactggtgatatt
gtttgttttgatggagaggggtatttgtatttatctgaccgcttgaaagagattataaag
tacaagggctatcagatcgcccctgctgatttagaggctgtattgatttcccatcccgag
atactagatgctgctgtaacttcagccgctgatgaagtatgcggtgagattcctgtggca
tttgtggtgaggaggcacggtagcacactgaccaaaggagctgtcatagacttcgtggct
aatcagtatatttccatatcagcagctaaggaaaccttgaatggacttctgaagtttgag
aacttcgtgcaacacacacagcagcagaaaccaatcaaatctttgagcttaaaagtctca
gctattattgatgggtcacacttttcaatgaattttgatcgttcaccatttttaatgtgg
tttagcgatgtcctcaatctgttcataggacaaaaatggtga
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