Gossypium raimondii: 105802905
Help
Entry
105802905 CDS
T04129
Name
(RefSeq) uncharacterized protein LOC105802905
KO
K12126
phytochrome-interacting factor 3
Organism
gra
Gossypium raimondii
Pathway
gra04075
Plant hormone signal transduction
gra04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
gra00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
105802905
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
105802905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gra03000
]
105802905
Transcription factors [BR:
gra03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
105802905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
TPP_enzyme_N
Motif
Other DBs
NCBI-GeneID:
105802905
NCBI-ProteinID:
XP_012490264
UniProt:
A0A0D2TDK0
LinkDB
All DBs
Position
11:complement(53947998..53950633)
Genome browser
AA seq
558 aa
AA seq
DB search
MAEKPTPESIPRRITTPFPNLSSMCDPNFVEHAWENDQNLIRGLSSKIPKKNFPGSGYFS
QSSKARIQHEGETPTVNTSKHGVADSTSTYGDPLSSITKTNRLNHHHHENYITSLQTGYR
ELLFEDGFNVALEADQKCYDQQLLDSNIVPTNKYKNFKQSNVLDVPELVHEIPQQTMNND
SQLPQPQPETCIPFMRSKDKYSRIDEKSERANFSIFLNSPALPKSNQIPCCGVTIPRSTP
GLAVEEDDDLEANARSIPFAKEAKSMKPILPDYEPEKEWVVPDEQSEAVGFNDNMRLPSS
RVGGTSSGLAPNTIMKGKVVEQKVASSSVCSRGASNCPVNTFERRYEDTDLSDNDELEEA
HETTKATPSKGSKRKRKSELHKLCERRRRDKINEKMRALQELIPNCNKVDKASMLDEAID
YLKTLQLQVQMMSMGTAGVYMPPMMLPASSMQHINARQLGGYSPMAMGMGMQMGLGCTTA
TQFPSVTSLMPGIMQARFNMLGLPRQVLLMSRSPFASLAATFPPQSVRTTSVSQALAAVP
LSTSKDSNPALQLKTRNA
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaaaccgacccctgaatcaatccctcgcaggatcacaactcccttccctaat
ttatcatccatgtgtgatccaaatttcgtggagcacgcatgggagaatgatcaaaatctg
attcgaggtttgtcgtcgaagatacctaaaaagaatttcccaggctctggttatttttct
caatcttctaaggctcgaattcaacatgaaggagaaacccctacggtgaatacatcaaag
cacggggttgcagattccactagtacgtatggcgatcccttatccagtatcactaaaacg
aatcgccttaatcatcatcatcatgagaattacataacttctctgcaaactgggtaccgg
gaactactattcgaggatggtttcaatgttgccttggaagccgaccaaaaatgctacgat
cagcaactcctagattccaatattgttcctacaaacaaatacaagaattttaaacaaagc
aacgtgctggacgtgcccgagctcgtacacgagattcctcaacaaactatgaataacgat
agccaactaccacagccacaacccgaaacttgtattccatttatgagatcaaaggacaaa
tattcaaggatcgatgagaaaagtgagagggcgaacttttccatcttcttaaactctcca
gctcttcctaaatccaaccagattccatgctgtggtgtaacaataccaaggagcactcca
ggtttagctgttgaagaagatgatgatttagaagccaacgccagatctattcctttcgca
aaagaagcaaaatccatgaagccaatattaccagattatgagcctgaaaaggagtgggtt
gttcctgatgagcagtccgaagccgttggctttaacgataatatgaggcttccttcttct
agggttggtggtacatcctcaggcttggcaccaaatacaatcatgaaaggaaaagttgtc
gagcaaaaggttgcatcgtcttcagtgtgctcgcgtggggcttcaaattgtccagttaac
acttttgaaaggagatacgaagatactgatctcagtgataatgatgaattggaagaagct
catgagacgacaaaagcaacgccaagcaaaggctctaagagaaagagaaaatctgaactt
cacaagctatgtgaaaggaggcgaagggataaaatcaatgaaaagatgcgtgcattgcaa
gagctcattcccaattgtaataaggtggataaagcttcaatgcttgatgaagcaattgat
tacttgaaaacgcttcagctccaagtccagatgatgtcaatgggaactgctggcgtttat
atgcctccaatgatgttaccagcttcgtcaatgcaacatataaatgcacgacaattgggt
ggttattctcccatggccatgggaatgggaatgcaaatgggtctaggctgcaccacagca
acacaatttccatccgtaacttcactaatgcctgggatcatgcaagctagatttaacatg
cttggcctccctcgccaagttttattaatgtcgcgttcacctttcgcatccttggctgca
acatttcccccacaatcggtccgaaccacttccgtttctcaagctcttgccgctgttcct
ctgtctacatcaaaggattcaaacccagcacttcaactaaaaacaagaaatgcttaa
DBGET
integrated database retrieval system
