Gossypium raimondii: 105803618
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Entry
105803618 CDS
T04129
Name
(RefSeq) DNA ligase 6 isoform X1
Organism
gra
Gossypium raimondii
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DRMBL
DNA_ligase_A_C
UBA_4
RMMBL
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
105803618
NCBI-ProteinID:
XP_012491347
UniProt:
A0A0D2SFT5
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Position
11:45814981..45826448
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AA seq
1406 aa
AA seq
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MSSQGTATATKTLALDSTQLYLTAIDSSDSTLSFPPIPSSFPPSKLIPNTRFLVDSFRHS
TTTTFSAAYFLSHFHSDHYSGLSPSWSKGIIFCSHLTSLLLIQTLKIPPHFVFPLPLNDP
VVVDGCEVILIDANHCPGAVQFLFKVPTKNGSFERYVHTGDCRYCNSMKLNSYLNDFVGC
DTIFLDTTYCNPKFVFPSQEESVDYVVSVVDRIGKEFKEKKVLFLVATYVVGKEKILVEV
ARRCKRKIFVDGRKMEILNVLGYGGDKVFTVDESESNVHVVGWNVLGETRPYFRPNFVRM
KEIMEEKGYEKIVGFVPTGWTYEIKRNKFAVRSKGSIEIHLVPYSEHSNYDELREYVKFL
KPKRVIPTVGMDIEKLDSKHADKLRRHFAGLVDEMANKKDFLMGFHRGNYGSVEKVEMDA
SPNLNENKDMERKKNILEMKSVESKNADITLNDSSPVQKPDSQDSAIPSEEERERKIEEL
GDFLPRWVTRDQKLNLISSSRWNVVEAVSNFYEHENELYEQISAFRTSDSASAAQAGSSN
NSVSPLNSGPFRSSSHESLISHLSQASKPSSFKLSVRSNISPGKRKKNTENKSNKKVKSN
SKLESSGSKQPMITSFFGKVLVDDSKGGGTGLKIEECPKEEITLPGDLTKSFTEKIDQFI
QIINGNESSRNYVVNLLEKTQGDINRALDIYYSNPEVNHDENMENIVVSSKSAPVWSCSN
DCPVSKNEHVLEESRSIPDSSLQGQPVENVDVTLVSLPPDKYKPIEHACWRSDQPAPYVH
LARTFDLVGSQRGKIKATSMLCNMFRSLLALSPEDVLPAVYLCTNKIAADHENIELNIGG
SLVTSALEEACGTNRSKIRDMYNDMGDLGDVAQACRQTQTLLAPPRPLLIRDVYSVLRKI
SVQTGSGSTMRKKNLIVNLIRSCREKEMKFLVRTLVRNLRIGAMMKTVLPALAQAVVMNS
SRDLCHEGTADCLKEKLQELSTAVTEAYNVLPNLDLLVPSLMKEGIAFSSSTLSMVPGIP
IKPMLAKITNGVPEVLELFQNKAFTCEYKYDGQRVQVHKLANGAVRVFSRNGDETTLRFP
DLINTIKESAKPAAQTFILDAEVVAIDRKNGHKLMSFQELSSRERGSKDSLITVDKIKVN
ICVFVFDIMFANGEQLLGVPLRQRRKCLKDLFHDEKLGHFEYAKEITVEADDACLTSEAT
FTQINSFLEDALQFSCEGIMVKALDTDAGYLPSKRSDTWLKVKRDYVEGLSDSLDLVPIG
AWHGNGRKAGWYSPFLMACYNPDTEDFQSVCRVMSGFSDSFYKEMKEFFSGDRILAKKPA
YYQTAEVPDMWFFPELIWEIRGADFTVSPVHQAAIGLVHPSRGISIRFPRFIRPVTDRNP
EECSTAADVAEMFHSQTRKMDVTAQQ
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctcaagggacggccaccgccaccaaaacacttgcgctagactccacccaacta
tacctcactgccatagactcttccgattccaccctttcttttccccctatcccctcctct
ttccctccctctaaactcatacccaatacccgattccttgtcgactccttccgccactcc
accaccaccaccttctccgccgcctacttcctctcccacttccactccgaccactactcc
ggcctctccccttcctggtccaaaggcatcatcttttgttcccacctcacttccctcctc
ctcatccaaacccttaaaatcccgcctcatttcgtcttccctttacctctaaacgacccc
gttgtggtagatggctgcgaggtcattctcattgacgccaatcattgccccggtgctgtc
cagttcttattcaaagttcccacaaaaaatgggagctttgaaaggtatgttcacacgggt
gattgtcgttattgtaattcgatgaagttgaatagttatttgaatgactttgttggttgt
gatacgatttttttagatactacttattgtaatccaaaattcgtgtttccttctcaagaa
gaatcggttgattatgtagttagtgtggtagataggataggaaaggaatttaaggaaaaa
aaggttttgtttcttgttgccacttatgttgttggaaaagagaagattttggttgaggtc
gcgaggcgatgtaagaggaaaatatttgttgatgggaggaaaatggagattttaaatgtt
ttggggtatgggggtgataaagttttcaccgtagatgagagcgagagtaacgttcatgtt
gttggttggaatgtattaggcgagactcggccgtattttcggccgaattttgtgagaatg
aaagagattatggaggaaaaagggtatgagaagattgttggttttgtgccgactgggtgg
acttatgaaattaaacggaataaatttgcagtgaggtcaaaaggttcaatcgagatacat
ctagtcccttacagtgagcattctaattatgatgagcttagagaatatgtgaagtttttg
aaaccaaagagagttattcctactgttggtatggacattgagaagcttgacagtaagcat
gctgataaattgagaaggcactttgctggtctggttgatgaaatggcaaataaaaaggac
ttcctgatgggttttcatcgtggcaattatgggagtgtagaaaaagttgaaatggatgct
agtcccaacttgaatgagaacaaggacatggagagaaagaaaaatatattggaaatgaaa
tctgttgagagtaaaaatgcagatattactttgaatgattcatctcctgtgcagaaacct
gattcacaagattcagctataccgagtgaggaggaaagagagagaaagattgaggaatta
ggtgactttttgcccagatgggtgaccagggaccagaaattaaatttgatcagcagctca
agatggaatgttgttgaagcagtttctaatttttatgaacatgaaaatgagttatacgag
caaatctctgcttttagaacttctgattctgcctctgctgctcaggcaggttcatctaac
aactctgtctcacctttgaattcagggccctttagaagtagcagtcatgaaagtttaatc
agtcatttaagtcaagccagcaagccttctagttttaaactttcagttcggagtaacata
tctcctggtaaaaggaagaaaaatactgagaacaagtcaaataagaaagtaaaaagcaac
tcaaaactggaatctagcgggtcaaagcaacctatgataactagcttcttcggtaaagtt
ttggttgatgactctaaaggtggtgggactggcttgaaaattgaggaatgccctaaagaa
gaaatcactttgcctggtgacttgactaaatcatttacagagaaaatagatcagtttatt
cagataataaatggcaatgaatcgtcaagaaactatgtggtcaacttacttgagaagacc
caaggagatatcaacagggcactggatatatattatagtaatcctgaagtgaaccatgat
gagaatatggaaaatattgtagtttccagcaaatcagctccggtctggagctgtagtaat
gattgccctgttagcaagaatgaacatgtgctggaggagtcaagatctattccggattca
tctttgcaaggacaaccagtggaaaatgttgacgtaactcttgtatcattgcctcctgat
aaatataaacccattgagcatgcatgctggaggtctgaccagcctgctccatatgtccat
cttgcacggacttttgaccttgttggcagtcaaaggggcaagatcaaagctacttctatg
ctttgcaatatgtttaggagtttgctggccttgtcccccgaggatgtgcttcctgctgtg
tatctgtgcaccaacaaaattgccgctgatcatgaaaatattgaattgaatattggcggt
agtttggttacatctgcactggaagaagcttgtgggactaaccgttcaaaaataagggat
atgtacaatgacatgggtgatcttggtgatgttgcacaagcatgccgacaaacccaaact
ttacttgctcctccacgaccactattaattagggatgtatattctgtgcttcggaagata
agtgtacaaacaggcagcggcagcaccatgcggaagaaaaaccttatcgtgaatcttata
cgttcatgtagagagaaagagatgaagtttctagtgagaactttggtcaggaatttgcga
ataggagcaatgatgaaaactgttcttcctgcattggctcaagcagttgtcatgaattcc
tctcgtgatctttgtcatgaagggacagcagattgtctaaaagaaaagctccaggaactt
tctacagcagtaaccgaagcatataatgtacttccaaatttggatttgcttgttccttca
ctaatgaaggaaggtattgcattttcatcatcaaccttgtcaatggttccgggaatacct
attaaacccatgcttgcaaaaattaccaatggggttccagaagtactggagctttttcaa
aacaaagcttttacatgtgaatataaatatgatggtcagcgtgtccaggttcacaaattg
gctaatggagcagtgcgtgtcttttcacgaaatggggatgaaacaacattaagatttcca
gatttaattaatacaattaaagaatctgctaagcctgctgcccagactttcatattggat
gctgaggtagttgcaatcgataggaagaatggtcacaagctgatgtccttccaagaatta
tcttcaagagaaagagggagcaaagattctttgatcacagtggacaaaataaaggttaat
atttgcgtatttgtgtttgacatcatgtttgctaatggagagcagctgctaggtgttcct
ctacgccaaagaaggaaatgtttgaaggatttgtttcatgacgagaagttgggtcatttt
gaatatgcaaaagaaatcacagtggaagcagatgatgcttgtttgaccagtgaggccacg
tttactcagataaactcttttctcgaagatgcattgcagttctcatgtgaaggaattatg
gttaaagccttagatactgatgctggataccttccgtcaaaacgtagtgatacatggtta
aaggtgaagcgagactatgtggaaggattaagcgattcccttgatttagtcccaattggt
gcttggcatggcaatggaagaaaagcgggatggtacagccccttcctcatggcatgctac
aacccagacactgaagattttcaaagtgtatgtcgtgttatgtctggattctctgattca
ttttacaaagagatgaaagagtttttttcgggggataggatcttagccaaaaagccagct
tactatcaaacagctgaggtgcctgatatgtggttctttccagaacttatttgggaaata
agaggtgcagacttcactgtatcaccggttcatcaggctgcgatagggttagttcatcca
tcgcgtggcatctcaataagatttcctaggttcattcgcccggtcacagatcgaaatcct
gaggaatgtagcacggcagcagacgtagctgaaatgtttcattcgcagactcgaaagatg
gatgtgacagcccaacaatga
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