Gordonia rubripertincta: GCWB2_00685
Help
Entry
GCWB2_00685 CDS
T05629
Symbol
ykoD
Name
(GenBank) Putative HMP/thiamine import ATP-binding protein YkoD
KO
K01552
energy-coupling factor transport system ATP-binding protein [EC:7.-.-.-]
Organism
gru
Gordonia rubripertincta
Brite
KEGG Orthology (KO) [BR:
gru00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gru02000
]
GCWB2_00685 (ykoD)
Transporters [BR:
gru02000
]
ABC transporters, prokaryotic type
Metallic cation, iron-siderophore and vitamin B12 transporters
Energy-coupling factor transporter
GCWB2_00685 (ykoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_29
DUF2232
AAA_22
AAA_16
AAA_23
AAA_28
nSTAND3
AAA_33
AAA_13
AAA_15
SbcC_Walker_B
NACHT
AAA_25
Mg_chelatase
ATP-synt_ab
SRP54
nSTAND1
NB-ARC
HMUDK_HMUD1
AAA_18
DUF87
Motif
Other DBs
NCBI-ProteinID:
ASR00974
UniProt:
A0A222TCL9
LinkDB
All DBs
Position
151772..153901
Genome browser
AA seq
709 aa
AA seq
DB search
MKNSPPLRPMEFASVAIFGGLTVAAVVIASVIPLAQAAGLLAPVPLALVAARTRPRALIT
ATVATTAVAFAMAGTGAMATVIGSALIGGIVGDLKRRGRGLGSLGLATLVASPLLGGVSV
LLLWVLVPLRELTIEAMTNSLHGVAKWLRGWGPTDAVADALDSMSLSIASHWWAWIWISG
TVGTAISLLAAWWILGGVIARLRDVPSEDTLTSDVTDAPASTATDVAPLPIVAERVGFAY
NPDSKPVLHDIDLRIDPGEFVAVVGANGSGKSTLAKILAGRAPTTGVVHRPGLAGLGVHG
GTALVLQRPEIQMLGSRVADDVVWGLPPDADVDVEALLAEVGLTGLGDRETTDLSGGQQQ
RLAIAAALARDPRLLIADEVTSMVDPEGRGQLLHLLASLPARRGIAVVLVTHRGSEAAAA
DRVIHLEAGRVVPHPPHWMPDPHADLDHASPTGSSASLAAPGPHIGGPLLVLDHVGYAHL
PGSPWEVVALTDVTMTVYRGEGLLIVGGNGSGKTTLAWIMAGLLSPRTGTCHLVNAAGKF
TPAAGYDAGEPVTGHVGAVGLGFQHARLQLQKVTVADEIMAAGGEKVGTAEVARVLELVG
LPREMAAGKVDSLSGGQMRRVVLAGLIARNPDMLVLDEPLAGLDPLAREEIVALLARLRA
DGMTIVIISHDFESLDSVCTRRVRLVDGQLLPDTHQNVDQPSGWDGGAR
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
gtgaagaactcgcccccgctgcgtccgatggagttcgcgtccgtcgcgatcttcggcggc
ctgaccgtcgccgcggtggtcatcgcctcggtcatcccgctggcgcaggccgccgggctg
ctcgccccggttccgctcgccctcgtcgcggcccgcacgcggccgcgtgcactgatcacg
gccacggttgcgaccacggcggtcgcgttcgcgatggcgggtacgggcgccatggcgacc
gtgatcggatcggcgttgatcggcgggatcgtcggcgacctcaaacgccgcggccgcggg
ctcggatcgctcggattggccacgctggtggcctcgccgctcctcggcggggtgtccgtt
ctccttctctgggtcctggtacccctgcgtgagctgaccatcgaggccatgacgaattcc
ctccacggtgtcgcgaagtggctgcgcgggtgggggcccaccgatgccgtggccgatgcg
ctcgactcgatgagcctcagcatcgcgagccactggtgggcgtggatctggatctccggc
accgttggcaccgcgatctcgctgctcgccgcctggtggatactcggtggcgtcatcgct
cgacttcgcgacgtgcccagcgaggacacgctcacctccgacgtgaccgacgccccggcg
tcgacggcaaccgacgtcgcgccgctgccgatcgtcgccgagcgggtcgggttcgcctac
aacccggactcgaaaccggtcctccacgacatcgacctgcgcatcgaccccggtgagttc
gtggcggtcgtcggcgccaacggttcgggtaaatcgacactcgcgaagatcctggccggt
cgcgccccgaccaccggcgtcgtgcaccgaccgggactcgccgggctcggcgtacacggc
ggcaccgcactcgtcctgcagcgcccggagatccagatgctcggttcccgcgtcgccgac
gacgtggtgtggggtctgccgccggatgccgacgtcgatgtggaggcgctcctcgccgag
gtcgggctgaccggcctcggcgaccgcgagaccaccgatctgtccggcgggcagcagcag
cggctggcgattgcggcggcgctcgcccgcgatccacggctcctcatcgccgacgaggtc
acctcgatggtcgacccggagggccgcgggcagctcctgcatctgctggcgtcgctaccg
gcccgacgcgggatcgcggtcgtgctggtcacccatcgcggcagcgaggccgcggccgcc
gaccgcgtcatccacctcgaggccggccgggtggttccgcatccgccgcactggatgccg
gacccccacgccgacctcgaccatgcttcaccgaccggatcgtcggcgtccctcgcggcg
ccggggccgcacatcggcggcccgctcttggtgctcgaccacgtgggttacgcgcacctt
cccggttcgccctgggaggtcgtggccctcaccgacgtcacgatgaccgtgtaccgcggg
gaggggttgctcatcgtcggcggcaacgggtcgggcaagacgaccctcgcctggatcatg
gcgggcctactgtcacctcgtaccggaacgtgtcacctcgtgaacgccgcgggaaagttc
actcccgcagccggttacgacgccggggagccggtcaccgggcatgtcggcgcggtcggg
ctgggcttccagcacgcgcgcctacagctgcagaaggtcaccgtcgccgacgagatcatg
gcggccggcggcgagaaggtcggtaccgccgaggtcgctcgtgtcctcgaactcgtcggc
ctgccgcgggagatggcggccggcaaggtcgattccctgtcgggcgggcagatgcgtcgt
gtcgtgctcgccggcctcatcgcgcgcaatcccgacatgctggtgctcgacgagccgctc
gccggtctcgacccgttggcccgagaggagatcgtcgcgctcctcgcgcgtctgcgcgcc
gacggcatgaccatcgtgatcatctcgcacgacttcgaatcgctggactcggtgtgcacg
cggcgcgtccggctcgtcgacgggcagttgctgcccgacacccatcaaaacgtcgatcag
ccgtccggctgggacggaggtgcccgatga
DBGET
integrated database retrieval system
