Gordonia rubripertincta: GCWB2_00970
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Entry
GCWB2_00970 CDS
T05629
Symbol
ppsA1
Name
(GenBank) Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsA
KO
K12437
polyketide synthase 13
Organism
gru
Gordonia rubripertincta
Brite
KEGG Orthology (KO) [BR:
gru00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gru01004
]
GCWB2_00970 (ppsA1)
Lipid biosynthesis proteins [BR:
gru01004
]
Polyketide synthase
Modular PKS
GCWB2_00970 (ppsA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
Ketoacyl-synt_C
PP-binding
Thioesterase
KAsynt_C_assoc
Thiolase_N
Abhydrolase_6
Abhydrolase_1
Motif
Other DBs
NCBI-ProteinID:
ASR01031
UniProt:
A0A222TD79
LinkDB
All DBs
Position
213546..218906
Genome browser
AA seq
1786 aa
AA seq
DB search
MSELNTDESRSTDLPDDSSFETPGSVDGATADASAAPAGAEATPGETAGDLTVDELRDWL
REWVSQATDVAIGQIDVDRPMEELGLSSRDAVALAADVEDKTGVILTATVVYNHPTISSL
AQRIIDGDPDEGLDDTADTFWQRERSADDDIAIVGLSTRFPKSGTTPESTWEALVGGVDG
ISDLPEGRWTEFTSDPRFAEILESSNIKGGYLDDVRSFDADFFQMSPREVEMVDPQQRLA
LELTWEALEHAHIPPSDLKGAPVGVFIGTSTNDYQLLATLGLREGAEDTAAYALTGTSTA
IVANRVSYFYDFRGPSIAIDTACSSSLVAIHQAVRSLRTGESDVALAGGVNMLLTPAATL
GFDRIGAQAKDGHIKAFSADADGMIRAEGGGLVVLKRMADARRDGDDVLAVIAGSAVNSD
GRSNGLPAPNPEAQVEVLRSAYTDAAIDPRTVDYVEAHGTGTILGDPIEADALGRVVGRG
RTADKPMLLGSVKTNYGHMESAAGAGAIAKVVLALKNGVIPASRNYSGPNPYIQFDATNL
KVIPETTEWPRYSGHAVAGISGFGFGGTNAHVVVREVLPSDLKPETVAVDAASSELPATG
SLPGEPDLDDEDEFLTEAERAVLAAQARNVEPEVAETAADPAEGFAPCAVEGSVVPLVLS
GFLPSRRRKTAADLLEWLESDEGRATPLADIGRALAHRNHGRSRAVVMARTHEDAITGVR
AIADGKGNPLVYSSDSPDAASAVWLLSGFGSQHRKMAKQLYTENPIFAKYVDRVDALIQN
ELGYSIAEMFLDDEQTYGIETSQVGIYTIQVALADTLRHHGAEPGVLVPHSMGEASASYI
SGGLSLEDATRVICQRSRLMGEGESMLQGDDIRLMALVEYSAEDINDVLVDYPDLEICVY
AAPTHTVIGGPESQVDAIVARAEAEGKLGRKLQTKGASHTSQMDPILGELAYELTGIEPR
RLTTGFYSSVDREVFYRAGHEPVHTIDYFLKGLRHSVWFSQAIQKSVENGHRTFLELSPN
PAVLISVAAVTFSAGLHDAELIETLRRKEDESFGLVNALMKLYVHGHPVDVASLFGAGGY
AAIPRTRFERKEFWLKAQLSSGGSAGSVPGSHVALPDGRHAWEVNAAAVTDPRALVHAAA
AQVLKNASVGAAVSHGEIPTGGTVTTTLSPHPGGASVSLHVKADKNFRLLFEAVVTGDLD
ETAGTVSAPATTAESGAAAFADDKVVVEDEIVDDIGNKWNPESGESVGDRLAIIVGESMG
YDPEDLPREIPLIELGLDSLMAVRIKNRVEYEFDIPQLQLQAMRQANLADVQKFVEFAVT
HRDQLDDLAENAGSGGELDTAALNAYIDEQNAKDTSSGVPAVEESPEPKQEVAQDVVDVE
DAVATSPGTDPEPVTAPKPTPEPKPATDITSQKAVAEAAGSDVPPRDAAERLTFGTYAVV
TKKSAGGIFNKLPVLSEEMAQQLTDRLNERTGGDIDVEDILDSETIEEMSNYVREHLDAG
ASTDGFLRYLRLVPEGKKVYDPAAGDPTPILLFHPAGGNTSAYEALLKRLPADRPVIGFD
RGVEGTIEDRVREYIPRLRELQPNGPYVLVGWSFGGALAYGVAQVLREAGEEVAFVGLID
VVRPREDMTETPDTKRARLERWKEFAIRNYDLDPDVPIPMERLVEADDEGQFAIIMEMMS
MSGTKIPGGIIEHQRTSFIENRVLSNIAPEPYDGKVVLYRADKMHAGAIELEPQWAEIDE
DGRWGEVVDDLEIIHIGGDHLSIVDEPYIAKIGADLATRLGELDKK
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaactgaataccgacgagtcacgcagcaccgatctgcccgacgattcgtccttc
gagacccccggttcggtagacggagcaaccgccgacgcgagcgctgcacccgccggcgcc
gaggccacccccggtgagaccgccggtgacctcaccgtcgacgagttgcgggactggctg
cgcgaatgggtgtcgcaggcgaccgacgtggcgatcggccagatcgacgtcgaccgcccg
atggaagagctcgggctgtcctcgcgcgatgcggtggcacttgccgccgacgtcgaggac
aagaccggggtcatcctgaccgccacggttgtctacaaccacccgacgatctcgtcgttg
gcccagcgcatcatcgacggcgatcccgacgaaggtctcgacgacacggccgacacgttc
tggcagcgcgagcgaagcgcggacgacgacatcgcgatcgtcggtctgtcgacccgcttc
cccaagtccggcaccaccccggagtcgacctgggaggcgctcgtcggcggcgtcgacggc
atctccgacctgcccgagggcaggtggaccgagttcacctccgatccgcgtttcgccgag
atcctggagtcgtcgaacatcaagggcggctacctcgacgacgtgcggtcgttcgacgcc
gacttcttccagatgagcccgcgcgaggtcgagatggtcgacccgcagcagcggctcgcg
ctggaactcacctgggaggcgctcgagcacgcccacattcccccgagcgacctcaagggt
gccccggtcggtgtgttcatcggtacgtcgaccaacgactaccagttgctcgcgaccctc
ggcctccgtgagggcgcagaggacaccgcagcctatgcgctgaccggtacctcgacggcc
atcgtggccaaccgcgtctcctacttctacgacttccgcggaccgtcgatcgccatcgac
accgcgtgctcgtcgtcattggtggcgattcaccaggcggtccgcagcctccgcaccggc
gaatccgacgtcgccctcgccggcggcgtcaacatgctgctcacccccgccgcgaccctc
ggcttcgaccggatcggcgcgcaggccaaggacggccacatcaaggccttctccgccgac
gccgacggcatgatccgcgccgaaggcggtggtctcgtcgtgctcaagcgcatggccgac
gcccgccgcgacggcgacgacgtcctcgcggtcatcgcgggctcggccgtcaactccgac
ggtcgttccaacggtctgcccgccccgaaccccgaggcccaggtcgaggtgctgcgttcg
gcgtacaccgacgcggcgatcgacccgcgcaccgtcgactacgtcgaggcccacggcacc
ggcaccatcctcggtgacccgatcgaggccgacgccctcggacgcgtcgtcggtcgcggc
cgcaccgccgacaagccgatgctgctcggttcggtgaagaccaactacggacacatggaa
tccgccgcgggtgcgggtgcgatcgccaaggtcgtcctcgcgctgaagaacggcgtcatc
ccggcgtcgcgcaactacagcggccccaacccgtacatccagttcgacgcgaccaacctc
aaggtcatcccggagaccaccgagtggccccgctactcgggccacgccgtcgccggcatc
tccggtttcggtttcggcggcaccaacgcccacgtggtggtccgcgaggtcctgccgagc
gatctgaagccggagacggtcgcggtcgacgcggcgtcgtcggagctccccgccacgggg
tcgctgcccggcgaaccggatctcgacgacgaggacgagtttttgaccgaggccgagcgg
gccgtcctggccgcccaggcgcgcaacgtcgagccggaggtcgccgagaccgcggccgac
ccggccgaaggcttcgcgccgtgtgccgtcgagggttcggtggtcccgctggtgctctcc
ggcttcctgccgtcgcgccgccgcaagaccgctgccgacctgctcgagtggctcgaatcc
gacgagggccgggccaccccgctcgccgacatcgggcgcgcgctcgcacaccgcaaccac
ggtcgttcacgtgcggtggtgatggcccgtacgcacgaggacgccatcaccggtgtccgt
gcgatcgccgatggcaagggcaatccccttgtctactcgtcggattcgcctgatgcggcg
tcggccgtgtggctgctgtcgggcttcggttcgcagcaccgcaagatggccaagcagctc
tacaccgagaacccgatcttcgcgaagtacgtcgaccgcgtcgacgcgctcatccagaac
gagctgggttactcgatcgccgagatgttcctcgacgacgagcagacctacggcatcgag
accagccaggtcggcatctacaccatccaggtcgcactcgccgacacgctgcgccaccac
ggcgcggaacccggtgtgctggtgccgcattcgatgggcgaggcctcggcctcctacatc
agtggcggcctgtcgctggaggacgcgacccgcgtcatctgccagcgttcgcgcctgatg
ggcgagggcgagtcgatgctgcagggcgacgacatccggctgatggcgctggtcgagtac
agcgccgaggacatcaacgacgtcctcgtcgactaccccgacctcgagatctgcgtctat
gcggcgccgacgcacaccgtcatcggtgggccggagtcgcaggtcgacgcgatcgtcgcg
cgcgccgaggccgaaggcaaactcggccgcaagctgcagaccaagggcgcgagccacacc
tcgcagatggacccgatcctcggtgaactcgcctacgagctcaccggcatcgagccgcgg
cgcctgaccacggggttctacagctcggtcgaccgcgaggtgttctaccgcgcgggtcac
gagccggtccacaccatcgactacttcctcaagggtctgcgccacagcgtgtggttcagc
caggccatccagaagtcggtggagaacggccaccgcaccttcctggagctgtcgcccaac
ccggcggtcctgatctctgttgccgccgtgaccttctcggccggtctgcacgacgccgag
ctcatcgagacgttgcgccgcaaggaagacgagagcttcggtctggtcaacgccctgatg
aagctgtacgtgcacggccacccggtcgacgtcgcgtcgttgttcggcgccggtggttac
gcggccatcccgcggacccgcttcgagcgcaaggagttctggctcaaggcgcagttgtcc
tcgggtggctcggccggttcggttcccggctcgcatgtcgcactgcccgacggccggcac
gcctgggaggtcaacgccgccgccgtcaccgacccgcgcgcgctggtgcacgccgccgcc
gctcaggtcttgaagaacgcctcggtcggcgccgcggtgtcgcacggtgagatcccgacg
ggcggcacggtcaccaccacgctgagcccgcatccgggtggcgcgtcggtgagcctgcat
gtgaaggcggacaagaacttccgcctgctcttcgaggccgtcgtgaccggtgacctcgac
gagaccgccggcacggtgtccgccccggcgacgaccgccgagtccggtgccgcggcgttc
gccgacgacaaggtcgtcgtcgaggacgagatcgtcgacgacatcggcaacaagtggaac
ccggaatccggtgagtccgtgggcgatcgcctcgcgatcatcgtcggcgagtcgatgggc
tacgaccccgaggacctgccgcgcgagatcccgctcatcgagctgggcctcgattcgctg
atggccgtgcggatcaagaaccgcgtcgagtacgagttcgacatcccgcagctgcagctt
caggcgatgcgccaggcgaacctggccgacgtccagaagttcgtcgagttcgcggtcacc
caccgcgaccagctcgacgacctcgccgagaacgccggcagcggaggcgaactcgacacg
gcggcgctcaacgcctacatcgacgagcagaatgccaaggacacatcgtcgggcgtgccg
gccgtggaggaatcgccggagccgaagcaggaggtggcccaggacgtcgtcgacgtggag
gacgccgtcgcgacctcgccgggcaccgacccggaaccggtcacggcccccaagcccacg
ccggagccgaagccggccaccgacatcacctcgcagaaggcggtcgccgaggccgcgggt
tcggatgtcccgccgcgtgatgcggccgagcgcctgaccttcggcacctacgcggtcgtg
accaagaagtccgcgggcggcatcttcaacaagttgccggtcctgtcggaggagatggcg
cagcagctgacggaccgcctcaacgagcgcaccggtggcgacatcgacgtcgaggacatc
ctcgactcggagaccatcgaggagatgtccaactacgttcgcgagcacctcgatgccggg
gcgtcgaccgacgggttcctgcgttacctgcgtttggttcccgagggcaagaaggtctac
gaccccgccgcgggcgacccgaccccgatcctgctgttccacccggccggcggcaacacc
tcggcctatgaggcgttgctcaagcggttgcccgccgaccggccggtcatcggtttcgac
cgcggcgtcgagggaacgatcgaagaccgtgtgcgcgagtacatcccgcgtctgcgcgaa
ctgcagccgaacgggccgtacgtgctggtcggttggtcgttcggtggtgccctcgcctac
ggtgtcgcccaggttctccgcgaagccggtgaggaggtcgccttcgtcggcctgatcgac
gtcgtgcgtccccgcgaggacatgaccgagacccccgacaccaaacgggcacgcctggaa
cggtggaaagagttcgcgatccggaactacgacctcgacccggatgtgccgatcccgatg
gagcggctcgtcgaggccgacgacgaggggcagttcgcgatcatcatggagatgatgtcg
atgtcgggcaccaagatccccggcggcatcatcgaacaccagcggacctctttcatcgag
aaccgtgtgctcagcaacatcgcgccggaaccgtacgacggtaaggtcgtgctgtaccgc
gcggacaagatgcatgccggtgccatcgaactcgaaccgcagtgggcggagatcgacgag
gacggccgatggggcgaggtcgtcgacgacctcgagatcatccacatcggtggcgaccac
ctgtcgatcgtcgacgagccgtacatcgccaagatcggcgccgatctggccacgcgtctc
ggcgagcttgataagaagtag
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