Gordonia rubripertincta: GCWB2_01245
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Entry
GCWB2_01245 CDS
T05629
Symbol
helD1
Name
(GenBank) Helicase IV
Organism
gru
Gordonia rubripertincta
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
PhoH
UvrD_C_2
UvrD_C
AAA_22
AAA_30
SLFN-g3_helicase
AAA_16
DEAD
DUF2388
Motif
Other DBs
NCBI-ProteinID:
ASR01083
UniProt:
A0A222TDZ5
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Position
complement(284392..286566)
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AA seq
724 aa
AA seq
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MPSAPLAPEPSTVFDLPPRLTVKADPTLIADDERHFASIATSLAESIADATARIAALRRS
DGGGGRRALDRDLEIHETLSRVRALQRFSLETCLGRIVGTDGEVLYIGRLGLTDAAGRTL
LVDWRTPVAAPFFAATLRDPAGLVSRRRYRWTQGRITDYWDEVFVDDPAALDRHAALDDQ
SAFIADLGAVRSPRMRDVLGTIAADQDAIIRAGSQGALVVDGGPGTGKTVVALHRAAYLV
YADPRLAGHRGGLLVVGPHRPYLNYVADVLPSLGEESVQTCTLADLFVEGDSVPTESDDR
VARLKSSVRMVAAVEPAVSFYEQPPTTPLVVETPWAEVTLTAADWAEAFDVPEPGTPHND
GRDEVWEELVSIIAAKHDADVPFGALRRALAGNEEFTSAFNRAWPVLRPADIVGDLWSVP
AYLRRCAPWLSPDEVRALQRDIPDAWTDADLPLLDAARRRVGDPEAALRRRRRRATVDAE
HERMNQVVDDLIAAQVHDDGEGLMTMLRGEDLRNALDDGVLADSDTPDRLAGPFAHIVVD
EAQELTDAQWQMLLSRCPSKSFTVVGDRAQARHGFTESWSDRLRRVGFDDVARSGLSINY
RTPEEIMAAAEPVIRAVLPDANVPTSVRRTGVPVRYGRRSALAGVVDEWLAGHDEGMVCV
IGDPEFEERERVRSLTPTLAKGLEFDLVVLVDPESFGNGIEGAVDRYVAMTRATNELVVL
TTDA
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
gtgccgtccgccccgctcgcccccgaacccagcactgtcttcgaccttccgcccaggctg
accgtcaaggctgaccccactctgatcgccgacgacgagcgacacttcgcctcgatcgcc
acgagcctcgccgagagcatcgcggacgccaccgcccggatcgcggcgcttcgccggtcc
gatggcggcggcgggcgtcgagccctggatcgggatctggagatccacgaaaccctctcc
cgcgtacgggctctgcagcgcttcagcctcgaaacgtgtctgggtcgcatcgtcggcacc
gacggtgaggtgctctacatcggccggctcggtctcaccgatgccgccggtcgaaccctt
ctcgtcgactggcgtacacccgtcgcggcacccttcttcgccgcgaccctgcgtgatccc
gcaggactggtcagtcgacgccgctaccgatggacgcaagggcggatcaccgactactgg
gatgaggtcttcgtcgacgacccggcggcccttgatcgtcacgcagctctcgacgaccag
tcggcgttcatcgccgacctgggcgccgtccgttcgccgcggatgcgggacgtgctgggc
acgatcgccgccgatcaggacgcgatcatccgtgccggctcccagggcgcgctggtcgtc
gacggcggccccgggacgggcaagacggtggtggccctccatcgggcggcctatctcgtc
tacgccgaccctcgactcgccggtcaccgcggagggctcctcgtcgtcggtccgcatcgc
ccgtacctcaactacgtcgccgatgtgctgccgagcctcggggaggagagtgtgcagacg
tgcacactcgccgatctcttcgtcgaaggggattcggtgccaacggaatccgacgatcgc
gtggcacgactgaagtcgtcggtacggatggtcgcagccgtcgagccggcggtgtccttc
tacgaacaaccacccacgacgccgctggtcgtcgaaaccccctgggccgaggtcactctc
accgccgcggattgggccgaggcgttcgacgtgcccgagccgggaacgccgcacaacgac
ggccgggacgaggtgtgggaggaactcgtctcgatcatcgccgcgaagcacgacgccgac
gtccccttcggcgcactgcggcgtgccctcgccggcaatgaggagttcacgtcggcgttc
aatcgcgcgtggccggttctacgaccggcggacatcgtcggcgatctgtggtcggtgccc
gcctacctgcgccgatgtgcaccatggctgtcgcccgacgaggtgcgtgccctgcagcgc
gacatccccgacgcctggaccgatgccgacctcccgctcctcgacgccgcgcgacgcagg
gtcggggatcccgaagccgcactgcgcagacgtcggcggcgggcgaccgtcgacgccgag
cacgagcggatgaaccaggtggtcgacgatctcatcgccgcgcaggtgcacgacgacggc
gagggtctgatgacgatgctccgcggcgaggacctgcgaaacgcgctcgacgacggcgtc
ctcgccgacagcgacacccccgaccggttggccggcccgttcgcgcacatcgtcgtcgac
gaggcacaggagctgaccgacgcgcagtggcagatgctcctgagccgttgcccgtcgaag
agtttcacggtggtcggcgaccgagcacaggcccgccacggattcaccgagtcgtggtcg
gatcggttgcggcgggtcgggttcgacgatgtcgcccggtcgggactgagcatcaattac
cggacgcccgaggagatcatggccgccgcggaaccggtcattcgtgccgtgctgcccgac
gccaacgtcccgacctcggtacgccgcacgggcgtcccggtccggtacggacggcgatcc
gcgctcgccggcgtcgtcgacgaatggctggccgggcacgacgagggcatggtctgcgtg
atcggcgacccggaattcgaagaaagggagcgggtccggtcgctgaccccaactctcgcc
aagggactcgagttcgatctcgtcgtgctcgtcgatccggagtccttcgggaacggcatc
gaaggggccgtcgaccggtatgtggcgatgacgcgggcgacgaacgaattggtggtgctc
accacagacgcgtag
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