Gordonia rubripertincta: GCWB2_01585
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Entry
GCWB2_01585 CDS
T05629
Symbol
dnaX1
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
gru
Gordonia rubripertincta
Pathway
gru03030
DNA replication
gru03430
Mismatch repair
gru03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GCWB2_01585 (dnaX1)
03430 Mismatch repair
GCWB2_01585 (dnaX1)
03440 Homologous recombination
GCWB2_01585 (dnaX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gru03032
]
GCWB2_01585 (dnaX1)
03400 DNA repair and recombination proteins [BR:
gru03400
]
GCWB2_01585 (dnaX1)
Enzymes [BR:
gru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GCWB2_01585 (dnaX1)
DNA replication proteins [BR:
gru03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GCWB2_01585 (dnaX1)
DNA repair and recombination proteins [BR:
gru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GCWB2_01585 (dnaX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
AAA_22
RuvB_N
AAA_30
AAA_19
AAA_14
AAA_16
Rad17
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
ASR01147
UniProt:
A0A222TE51
LinkDB
All DBs
Position
357848..360448
Genome browser
AA seq
866 aa
AA seq
DB search
MALYRTYRPATFADVVGQEHVTDPLSRALDSGRINHAYLFSGPRGCGKTSSARILARSLN
CVGGPTSRPCGTCTSCVALAPGGPGNLDVIELDAASHGGVDDTRELRDRAFYAPAESRYR
VFIVDEAHMVTNAGFNALLKIVEEPPEHLIFVFATTEPEKVLPTIRSRTHHYPFRLLAPP
VMRGLLEKICEREGVTVAPEVYPLVIRAGGGSPRDSLSILDQLLAGADDQGVAYERALAL
LGVTDVALIDTAVEALASADGAALFGAVEKVVDAGHDPRRFAVDLLERLRDLILLQAVPD
AADRGLVEAPGDQLARMRGQIETLGPASLTRFAEIVHDALGEMRGTTSPRLLLEVMCARM
LLPGVSNDDAALLQRLERLESGIGTTSIPVPAKPAEPEPEPKFVRPSQRKAMEEAKAAEE
ARRAAAEAAEADTPVAPPASVPAAPAAAVPPMPTAPEPTAPEPPAPVAKAEPAPAEPAAA
APEPEPAAPAAEPVAVAPQAAAAAAVETDDADMLEELIVEQPAPDAIADPDVLPDPDALP
EPDALDLGDLDTIDTETTGTESVEVDAAAPTLDVPWAEPEAETATPAQPVPEPVRPAVRN
GGTPTAPEPPSRAPMAEPAREPAREPVAEPAQSAYSDDIPLPEEPVDEYSVPPPDAIPVR
AKRPAPEPEPEPEPEPAAPGGLDADAIRKRYPDIRSAVRERSKSLEPMLSAAVIADLEGT
TVVLGHPVEVLVGRLSAPHAVTIIREALAEVFGTPLDVRTVHQAPGTAVASAAAGGAQSA
KQQAKPRQSYSRPSRSRDQSAAAAPPPEPVAEPEEPEPPRADEDIPDEERAEMVADARTG
APEQRLDPDLVALELLKSELGARPIE
NT seq
2601 nt
NT seq
+upstream
nt +downstream
nt
gtggctctgtatcgcacctatcgcccggctaccttcgccgacgtcgtggggcaggagcac
gtcaccgatccgttgagccgtgccctcgactcggggcggatcaatcacgcgtacctcttc
tccggtccgcgcggttgtggcaagacgtcgtcggcgcgaatcctggcgcggtcgttgaac
tgtgtcgggggccccacctcgcgtccctgtggcacctgcacgtcgtgcgtggctctcgcc
cccggcggtcccggcaacctcgacgtcatcgaactcgacgcggccagccacggcggcgtc
gacgacacccgcgagctgcgtgaccgcgcgttctatgcgccggccgagtcgcgctatcgc
gtgttcatcgtcgacgaggcgcacatggtgaccaacgccggcttcaacgcgttgctcaag
atcgtcgaggagccgccggagcacctcatcttcgtgttcgcgacgaccgaacccgagaag
gtgctgccgacgatccgctcgcgtacccaccactacccgttccgtctgctcgccccgccg
gtcatgcgcgggctgctggagaagatctgtgaacgggagggcgtcaccgtcgcgcccgag
gtctacccgctggtcatccgtgccggcggtggttcgccgcgtgactcgttgtcgatcctc
gatcagctcctcgccggcgccgacgaccagggcgtcgcgtacgagcgggcgctcgcattg
ctcggcgtcaccgatgtcgcgctcatcgacaccgccgtcgaggcactggcgtcggccgat
ggcgcggcgctgttcggcgctgtggagaaggtcgtcgacgcgggtcacgacccacgacgc
ttcgcggtcgatctcctcgaacggctccgtgacctgatcctgctgcaggcagtccccgat
gccgccgaccgtggcctggtcgaggcgccgggtgatcagctcgcacggatgcggggccag
atcgagacgctcggccccgcctcgttgacgcgcttcgccgagatcgtgcacgacgccctc
ggcgagatgcgcggaaccacgtcgccgcgactcctcctcgaggtgatgtgcgcgcgcatg
ctgctgcccggggtgtcgaacgacgacgcggccctgctgcagcggctcgagcgtcttgag
tcggggatcggcaccacgtcgatcccggtgcccgcgaaacctgctgagcccgaaccggaa
ccgaagttcgtgcgtccgtcgcagcgcaaggccatggaagaggcgaaggccgccgaggag
gcacgtcgcgctgcggccgaggccgccgaagccgacacccccgttgctccgcctgcatcc
gtaccggctgccccggctgctgcggtgcccccgatgccgaccgcaccggaacccaccgca
cccgaaccgcctgcgccggtcgcgaaggccgaaccggcgccggccgaacccgccgctgcg
gctccagagcccgagccggccgcgcccgccgcggaaccggttgctgtcgcaccgcaggcc
gccgcggccgccgccgtcgagaccgacgacgcggacatgctcgaggaactgattgtcgag
caacccgcgcccgacgccatcgccgacccggatgtccttcccgatcccgacgcgcttccg
gagcccgacgcgctcgatctcggggatctcgacactatcgacaccgagaccaccggcacc
gagtctgtcgaggtcgacgctgctgcaccgactctcgacgtcccctgggctgaacccgaa
gcggagaccgccacgcctgcgcagccggttccggaacccgtgcgcccggcggtccggaac
ggcggaacccccacggcgccggaaccgccttcgcgtgcgccgatggccgaaccggctcgg
gagccggcccgggaacctgtcgccgagccggcgcagtcggcctattccgacgacatcccg
ttgccggaagagccggtcgacgagtactcggtcccgccgcccgatgcgataccggtgcgg
gcgaaacgccccgcgccagagcctgaacccgagccggagccagaaccggctgccccgggc
gggctcgacgccgacgcgatccgcaagcgctacccggacatccggtccgcggtgcgggag
cgttccaagagtctcgagccgatgttgtcggcggcggtcatcgccgatctcgagggcacc
acggtggtgctcggtcacccggtcgaggtgctcgtcggacgactctcggcgccgcacgcg
gtgacgatcatccgcgaggcacttgccgaggtcttcggcacaccgctggacgtgcggacg
gtgcaccaggccccgggcacagcggtagcgtcggcggcggccggtggcgcacagtctgcg
aagcagcaggccaagccccgacagtcgtactcacgcccgagccggtctcgtgaccagtcg
gcggccgcggctccgccgcccgaaccggtggccgaaccggaggagcccgagccgccgcgg
gccgacgaggacatccccgacgaggagcgcgccgagatggtcgccgacgcgaggacgggg
gctcccgaacagcggctcgaccccgacctggtagccctcgagctactcaaatcggaactc
ggcgcccggccgatcgagtga
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