Gordonia rubripertincta: GCWB2_18145
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Entry
GCWB2_18145 CDS
T05629
Symbol
uvrD4
Name
(GenBank) ATP-dependent DNA helicase UvrD1
Organism
gru
Gordonia rubripertincta
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
UvrD-helicase
UvrD_C
AAA_19
Viral_helicase1
AAA_30
UvrD_C_2
AAA_12
DEAD
AAA_11
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
ASR04402
UniProt:
A0A222TMI5
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Position
complement(3948115..3951540)
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AA seq
1141 aa
AA seq
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MPHDSMEPMSRKPGTQASRSALRARLVAAPEAADRPREWPPAIAQVIDPAASIPAGEEEQ
AWRPVRVHGGPGSGKTALIVDAAVARLLDPATDPESVLVLASSRRAAVALREEITRRVLS
ANAAGRRVLGGALREPLVRTVHSYAFAILRLQASAHGNPPPRLITGSEQDVVLRELLAGD
IEDGAEYWPAHLRPALGTDGFAQALRDLMMRAAERGVGPEELAALGREHKRPEWTAAARA
YAQYEQNMLLRGAVGLETPGASAPAVDAAELIGSALSAFATDPDLLSGERRRIRHLLVDD
AQHLDPQAAQLIRLVGTGTTSTIIAADTDQSVFGFRGASPRFADGLAEPGSERDIVLEHD
FRSHPDLARLGRAIAARLPGARPHAYPLPVQAESDAAVPRDVAAVRVYGSAAKEATAIAD
LLRRAHLFDGVPWSQMAVIVRSVSLALPPLRRAFRSAGVPVTTPASDLPLHRQRAVIALM
LVLRVVAARREDPATRSEATPDSELFTTEDTLTLLSGPVGAADPGAMRRLRRGIRRLDEK
NDPTAQPDSLTSLTRALLDPELGARYRRALTETEAAPLARVLDVVAAGQRAHDAGRGVEE
TLWASWQATGLERRWAASAVRGGPAGEQADRDLDAVMAMFEAAANFADTLPAAGPAGFVH
YLSQLQIPRDSRTATAATESVTVLSAHAAVGREWEVVAVAGVQDGLWPSLRSRGGVLSTG
ALVDILDGMDAGAVDTVARGATALADERRLFLVACTRARSRLLVTAVEDGSGDASPSRFL
TELADLVDDPDDEAPQAELQLDPGVDRVLSLPSLVATLRSVVMAGAHEPDERTRAAARLL
AELADSDIPGAHPRDWFGLAEPSTDAPLWTPDNGPVVLSPSNVEALNRCSLRWVLERNGG
RDGDGTPALTGSLVHTLVQAVAGQLDPAEVTAALRGIWDRVDTGAGWYSARELERAESML
GHFRDWLRISRADLEEVGVELPVDATVPGGPTGDPDEEDAPDVRLRGRVDRLETDSAGRP
VVVDVKTSKNAITKAEADEHAQMAAYQVALAHGGVPQFGDVPPGGARLVYVSTANRNSGA
AERVQSPLTPEMLDEWIGVVRRAARASIGPTFTATPNPGCVHCNLTTSCPAKIPGKAVTD
D
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
gtgccacatgattcgatggagcccatgagtcggaaaccgggcacccaggcgtcgcgcagc
gccctgcgcgcacggctcgtcgcggcgcccgaggccgcggaccgtcctcgagagtggccg
ccggcgatcgcgcaggtcatcgacccggcggcgagcatcccggccggcgaggaggagcag
gcctggcgtccggtccgggtccacggcggaccgggtagcggcaagaccgccctgatcgtc
gacgccgcggtcgcgcgcctgctcgaccccgcgaccgatccggaatcggtcctcgtcctg
gcgtcgagccgccgggcggcggtcgcgctgcgggaggagatcacccggcgcgtgctctcg
gccaacgcggccgggcgtcgcgtgctgggcggtgcgctccgcgaacccctcgtacgcacc
gtgcactcctacgccttcgcgatcctgcgcctgcaggcgagtgcgcacggcaacccgccc
ccacggctcatcaccggttccgaacaggacgtcgtgctgcgcgagctgctcgccggcgac
atcgaggacggggcggagtactggccggcacatctgcggccggcgctcggcaccgacggc
ttcgcgcaggccctgcgcgacctgatgatgcgggccgccgaacgcggcgtcggaccggag
gaactcgcggccctcggtcgcgaacacaaacgccccgagtggaccgccgcggcccgtgcc
tacgcccagtacgagcagaacatgctgctgcgcggcgcagtcggactcgagacgcccggt
gcatcggcaccggcggtcgacgccgccgagctgatcggttcggcgttgtcggccttcgca
accgaccccgacctcctcagtggcgaacgtcgccgcatccgtcacctgctcgtcgacgac
gcccagcatctggatccgcaggccgcacagctgatccggctggtcggcacgggcaccacg
tcgacgatcatcgcggccgacaccgatcagtcggtcttcgggttccgcggggccagtcct
cgtttcgccgacgggctggccgagccgggctccgagcgcgacatcgtcctcgaacacgac
ttccgctcccaccccgacctcgctcgcctgggacgtgcgatcgcggcacggctccccggg
gcgcgcccgcacgcgtatccgctaccggtgcaggccgagtccgacgccgccgtgccgcgc
gacgtcgcggccgtgcgcgtgtacggttcggcggccaaggaggccaccgcgatcgccgat
ctgctgcgtcgcgcgcacctgttcgacggcgtcccgtggtcgcagatggccgtgatcgtc
cgctcggtgtccctcgccctgcccccgctgcgccgcgcattccgctcggccggtgtcccg
gtgaccaccccggccagcgacctgccgctacaccgccagcgtgcggtgatcgcgctgatg
ctggtgttgcgcgtggtcgccgcccgccgcgaggacccggcgacacggagcgaggcgacc
ccggactccgagctgttcaccaccgaggacacgctcacgctgctgtcggggccggtcgga
gcagccgaccccggagcgatgcgacgcctacggcgcggcatccggcgcctcgacgagaag
aacgacccgacggcacaaccggattcgctgacttcgttgacccgcgcactcctcgacccc
gagctcggcgcgcggtaccgccgtgccctcaccgagaccgaggcggcgccgctggcccgc
gttctcgacgtcgtggccgccggacagcgggcacacgatgccggccgcggcgtcgaggag
acgctgtgggcgtcctggcaggccaccggtctggaacggcgctgggcggcgtcggccgtc
cggggtggtccggccggggaacaggccgaccgtgacctcgacgccgtgatggcgatgttc
gaggcggcggccaacttcgccgacaccctgcccgccgccggaccggccggcttcgtccac
tacctctcccagctgcagatcccacgcgacagccgaaccgccacggcggcaaccgaatcg
gtgaccgtgctgtccgcgcacgccgcggtgggccgcgaatgggaggtcgtcgcggtggcc
ggtgtccaggacggcctgtggccgtcgctgcgcagtcgcggcggtgtcctgtccaccggg
gcgctggtcgacatcctcgacggcatggacgccggcgcggtcgacaccgtcgcccgcggt
gccacggcactcgccgacgagcgccggctgttcctggtcgcgtgcacgcgtgcgcgcagc
aggctgctggtcaccgcggtggaggacggcagcggtgacgcctcgccctcccggttcctc
accgaactcgccgatctcgtcgacgatcccgacgacgaggcgccccaggccgaactccag
ctcgaccccggcgtggaccgcgtactgtcgctgccgtcgctggtcgccacgctgcgctcg
gtggtcatggccggtgcccacgaacccgatgagcggacccgggctgcggcccgcctgctc
gccgaactcgccgattccgacatccccggcgcccacccgcgcgactggttcggactcgcc
gaacccagcaccgatgcgccgctgtggacaccggacaacggacccgtcgtgctgtcgccg
tcgaatgtcgaagcgctgaaccgctgttcgctgcggtgggtgctcgaacgcaacggcggc
cgcgacggtgacggcacgcccgcgctcaccggcagcctggtgcacaccctcgtacaggcc
gtggcggggcagctggatccggccgaggtgaccgcggcgctgcgcgggatctgggaccgg
gtcgacaccggcgcgggctggtattcggcgcgcgaactcgaacgcgccgagagcatgctc
ggccacttccgtgactggctgcggatctcgcgtgccgacctcgaggaggtgggcgtcgaa
ttgccggtcgacgccaccgttcccggcggcccgaccggtgaccccgacgaagaggatgcg
cccgacgtgcggctgcgcggccgcgtcgaccgcctcgagaccgattcggccggccgcccg
gtggtggtcgacgtcaagacgtcgaagaacgcgatcaccaaggccgaggccgacgagcac
gcgcagatggcggcctatcaggtcgcgctggcccacgggggagtcccgcagttcggtgat
gtaccaccgggcggggcgcgcctggtctacgtgtccaccgcgaaccgcaattccggtgcg
gccgaacgagtccagtcgccgttgacacccgagatgctcgacgagtggatcggcgtcgtg
cgccgggcagcgcgggccagcatcggcccgaccttcaccgcgacgcccaaccccggctgc
gtgcactgcaatctcaccacgagctgccccgcgaagatccccgggaaagcggtgaccgat
gactag
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