Geoalkalibacter subterraneus: GSUB_04475
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Entry
GSUB_04475 CDS
T03585
Name
(GenBank) hypothetical protein
KO
K03631
DNA repair protein RecN (Recombination protein N)
Organism
gsb
Geoalkalibacter subterraneus
Brite
KEGG Orthology (KO) [BR:
gsb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsb03400
]
GSUB_04475
DNA repair and recombination proteins [BR:
gsb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GSUB_04475
TLS (translesion DNA synthesis) factors
Other SOS response factors
GSUB_04475
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_22
AAA_21
AAA_29
DUF4080
AAA_15
Med9
Motif
Other DBs
NCBI-ProteinID:
AJF05966
UniProt:
A0A0B5FQU6
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All DBs
Position
997792..999465
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AA seq
557 aa
AA seq
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MLTDLNIRNFAIIDRLHVRFGAGFNVLSGETGAGKSILLGAVGLLLGARARVEDIRTGED
EAAVEALFEIDEQMAADLAPLFEEGAIDFDGSEVLIRRLVSRNGKNRVFLNGALVTLGQL
QAVTGKLVTIYGQHEHQSLLKSENHLKLLDDFAGSRSLLASYRRAYEDLRRARENLDRLE
TGERERRQRIDLLSFQSSEIAAAHLQEGEDEELESERRLLQNAEKLTAATLGGFNHLYGE
DGAVCEMVDQAATSLETLLEVDSRLGEFAEALRSAQYSLEDVAAQLRSYSEVLTFDPQRL
DEVENRLAVLAGLKRKYGSTVADILAYRDQIDKELTELEDIDESRAQVTARIEQCEKDVR
ARGEELSALRRQAALELAQKVEHELTDLAMGQARFEIRCSTLEDFSANGLEKVEFFLAPN
PGEEARPMARIASGGELSRIMLALKRAAPGHETQTLIFDEVDAGIGGVTATRVGEKLRSL
ASEQQVLCVTHLPQVAAFADRQYLIAKSEVDGRTRTEVDLLDEQGRVREMARMLGGARTT
ERSLEHARELISSSVVR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
gtgctgaccgatctcaacatccgcaactttgcgatcatcgaccggctgcatgtgcgtttc
ggcgccggtttcaacgttctcagtggagaaaccggcgccggcaagtccattcttctcggc
gcggtcggcctgctgcttggcgcgcgggcgcgtgtcgaggatatccgcaccggagaggat
gaagccgctgtggaggccttgtttgagatcgacgagcagatggcggccgaccttgctccg
ttgttcgaggagggggcgatcgacttcgatggatcggaggttctgattcgccgactcgtg
agccgcaacggcaaaaatcgcgtgtttctcaacggcgccctggtcactctggggcagctg
caggctgtcaccggaaaactggtgaccatttacggccagcatgagcaccaaagtctgctc
aagtctgaaaatcacctgaaactgcttgatgattttgccggcagcagatctcttctcgcc
tcttatcgcagggcttatgaagatctccggcgggcgcgcgagaatctggaccggctggaa
accggcgaacgcgaacgacggcagcgcatcgatctgctctcttttcaaagcagcgaaatt
gccgcagcgcatctccaagagggggaagacgaagagcttgagagtgaaaggcgcctgctg
cagaatgctgaaaaactcactgccgcgacgctgggcggatttaaccatctgtatggggag
gatggagccgtctgcgagatggtcgatcaggcggcgacctccctcgaaacactgctggag
gtggattcacgcctgggcgaatttgccgaagccctgcgcagcgcacaatacagcctggag
gatgtcgcggcgcagctgcgcagttattccgaggtcctgaccttcgatccccagcgcctt
gatgaagtggaaaaccgtcttgccgtgctggccgggttgaagcgcaaatacggcagcacc
gttgccgacattctggcttatcgtgaccagatcgacaaagagcttactgaacttgaggat
atcgacgagtcgcgcgcacaggtcaccgcccgtatcgaacagtgcgaaaaggatgtccgt
gctcgcggcgaagaactctctgccctccggcgacaggctgctcttgagctggcgcagaag
gtggagcatgaactgacggatctggccatggggcaggcccggttcgagatccgctgcagc
acgctcgaggatttttccgctaatggcctggagaaagtcgagttttttcttgcgcctaac
cccggcgaggaagcgcgccccatggcccgcatcgcttcaggcggcgagctgtcccgcatc
atgctggccctgaagcgagccgccccggggcatgaaactcaaacgctcattttcgatgaa
gtcgacgccggcatcggtggcgtgactgccacgcgggtcggtgagaagctgcgctcactg
gcgtcggagcagcaggtgctgtgcgtaacacacctgccccaggtggccgctttcgccgac
cggcagtacctcatcgccaagtccgaggtcgacgggcgaacccgcaccgaagttgatctg
cttgatgagcaggggcgggtccgggagatggcccgtatgcttggaggcgcgcgcaccacc
gagcgcagtcttgagcacgcacgtgagctgatcagctcttccgtggtgcgctga
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