Geotrypetes seraphini (Gaboon caecilian): 117348811
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Entry
117348811 CDS
T09159
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04142
Lysosome
gsh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117348811 (CLTC)
04142 Lysosome
117348811 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117348811 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gsh04147
]
117348811 (CLTC)
Membrane trafficking [BR:
gsh04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
117348811 (CLTC)
Exosome [BR:
gsh04147
]
Exosomal proteins
Proteins found in most exosomes
117348811 (CLTC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
Coatomer_WDAD
TPR_1
Motif
Other DBs
NCBI-GeneID:
117348811
NCBI-ProteinID:
XP_033777202
UniProt:
A0A6P8NM80
LinkDB
All DBs
Position
15:43187003..43397297
Genome browser
AA seq
1675 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPTN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTVSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKSLILVVRGQF
STDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDMELINVCNENSLFKSLSRYLVRRKDPELWASVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANASGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYRAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNYFS
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDRLYKDAMQYASESKDTELAEELLQWFLLE
EKRECFAACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMREYLSKVDKLDASESLR
KEEEQATETQPIVYGQPQLMLTAGPSVPVPPQAPFGYGYAAAPYGQPQPGFGYSM
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaattcttcctattcgcttccaggagcacttacagctccagaatctaggtatt
aacccagctaacattggcttcagtactctgaccatggagtctgacaaattcatctgtata
agagagaaagttggtgaacaggctcaagtggtaatcattgacatgaatgatcccacaaac
cccattcgccgtccaatttcagcggacagtgccatcatgaatcctgctagcaaagtcatc
gccctaaaagctggaaaaacacttcagatctttaacattgagatgaaaagcaaaatgaag
gcgcataccatgacggacgatgtcaccttttggaagtggatttctctgaacaccgttgcc
ttggtaacagataatgcagtataccactggagcatggagggcgaatctcagccagtaaaa
atgtttgaccgacattccagcctggcaggttgtcagatcatcaattatcgtacagatgcc
aagcagaaatggttgcttctgacgggtatttctgcacagcaaaatcgtgtggtcggtgca
atgcagctttattctgtggataggaaggtgtcccagcccattgaggggcatgcagcaagt
tttgctcagttcaagatggaaggaaatgctgaagaatcaacgttgttctgctttgctgtg
agagggcaagcgggaggcaagctgcatatcattgaagttggcacgcctcccactgggaac
caaccatttccaaagaaagcagttgatgtcttttttccaccagaggcacagaatgatttt
ccagttgcaatgcagattagtgaaaagcatgatgtggtgttcctaataaccaaatatggt
tatatacatctatatgacctagaaactggaacttgcatttacatgaacagaattagtgga
gaaactatctttgtcaccgcaccccatgaagctactgctggaattattggtgtaaaccga
aagggacaagtgttgtctgtgtgtgtggaggaagagaacatcattccatacatcaccaac
gttctgcagaaccctgacctggctttgcggatggctgtacggaacaatctggctggagct
gaggagctttttgcccgaaaattcaacgccctctttgctcagggaaattattcagaagca
gcaaaagtggcagcaaatgcaccaaaggggatcctgcgtacgccagatactattcgtcgg
ttccagagtgttcctgcacaacctggtcagacttccccattgctccagtactttggaatc
ttgctggatcagggccaactgaacaaatatgaatcattggagctttgtaggcctgtcctt
caacaagggcgcaagcaacttcttgaaaagtggcttaaagaagacaagctggaatgctcg
gaggagttgggtgatttagtgaagtctgtggatcccaccttggcgttgagtgtttaccta
agagccaatgttcctaataaagttattcagtgctttgcagaaacaggacaagtccagaag
attgtgctgtatgctaagaaagttggatatactcctgactggatcttccttctgaggaat
gtcatgagaatcagtcctgatcaaggccagcagtttgctcaaatgttggttcaggatgaa
gaacctcttgcagatattacacagattgttgatgtctttatggaatacaacttaattcag
cagtgtactgcttttctgttggatgcactgaagaacaataggccatctgagggtccccta
caaacgcgtctgcttgagatgaacctcatgcatgctcctcaggtggcagatgctattttg
ggaaaccagatgttcactcattatgatcgtgcacacattgctcagttgtgtgagaaggca
ggacttctgcagcgtgctctggaacatttcaccgatctctatgatattaaacgggctgtg
gttcacacacacctcctaaaccctgagtggctggtgaattactttggctcgctgtcagtt
gaagattctctggagtgtttgcgtgctatgctctcggcaaatatccgccagaatctgcaa
atttgtgttcaagtggcgtcaaaataccatgagcagctgtcgacagtgtcgcttattgaa
ctctttgaatctttcaagagttttgaaggccttttttacttcctgggctctattgtaaac
ttcagccaggatcccgatgtgcacttcaaatatattcaggctgcctgcaaaactggccaa
attaaggaggtggaaagaatctgtcgagaaagtaactgctatgatcctgagcgtgtgaaa
aatttcctgaaggaagctaagcttacagaccagctgcccttaattattgtatgtgatcgc
tttgactttgtccatgacctggtgctttacttgtacagaaacaaccttcaaaaatacatt
gagatttatgtgcagaaggtaaatccaagccgtctgccagtggtgattgggggattactg
gatgtagattgttctgaagatgtaataaaaagcctaattcttgttgtgaggggtcagttt
tcaactgatgaacttgtggctgaagtagaaaaaaggaataggttgaaactattgctaccc
tggctggaatctagaattcatgagggatgtgaggaaccagctacccataatgcactggcc
aaaatctacattgatagcaacaacaacccagaaagatttctccgtgagaacccctattat
gacagccgagtggttgggaagtactgtgaaaagagagacccacatctggcatgtgtggct
tatgagcggggccagtgtgatatggaacttatcaatgtatgtaatgaaaattctctcttc
aaaagcttgtcacgctatctagtacgtcgtaaggaccctgagctctgggctagtgtcttg
ctggaaagcaacccttacaggagacctcttattgatcaggttgtgcaaacagcactgtct
gaaactcaggaccctgaagaggtatcggttacagtaaaagccttcatgactgcagatctt
cccaatgaactcattgaactactggagaaaattgtcctagataactctgttttcagtgaa
cacagaaatctacagaatctcctcattctcactgccatcaaggctgaccgtactcgtgtt
atggaatacatcaatcgtttagacaattatgatgccccagatattgctaatattgccatc
agtaatgaactttttgaggaagcttttgctatcttcaggaaatttgatgtgaacacctct
gctgtgcaggtactgattgaacacattggaaatctggaccgcgcttatgagtttgctgaa
cgatgcaatgaaccagctgtatggagccagttggcaaaggcacaactgcagaagggaatg
gtcaaggaagctattgactcgtatatcaaggcagatgatccatcttcctacatggaagtt
gttcaggctgctaatgccagtggtaattgggaagagctggtgaaatacttgcagatggca
cgcaaaaaggcccgggagtcttatgtggagacagaactcatctttgctctggctaaaacc
aaccgcctggctgaactagaagagtttatcaatggacctaacaatgcccacattcaacaa
gttggtgatcgctgctatgatgaaaaaatgtatgatgctgctaagctgttgtataacaat
gtctcaaactttggtcggttagcatcaacactggttcacttaggcgaatatcaagcagct
gttgatggtgccaggaaagccaatagtactcgcacatggaaagaggtttgctttgcttgt
gttgatgggaaagagtttcggctggcccagatgtgtggccttcatattgtggtacatgca
gatgaactggaggaactcatcaactactaccaggaccgaggctactttgaggaactaata
acaatgttggaagcagcacttggcctagaacgtgcccatatgggaatgtttacagagcta
gcaatcttatattctaaattcaaaccccagaagatgagagaacacttagagcttttctgg
tctcgtgtgaacattcccaaggtgctaagagcagcagaacaagctcacctctgggcagaa
ttggtgtttttgtatgacaaatatgaagagtatgataatgctatcatcacaatgatgaat
catccaacagatgcatggaaagaaggacaatttaaagacatcatcactaaggtggctaat
gtcgagctgtattatagagcaatccagttttatttggaattcaaacctctgttacttaat
gatctccttatggtgctgtcgcctcggcttgatcacacccgtgctgtcaactactttagc
aaggttaaacagcttccgttggtaaaaccatacttacgttctgttcaaaaccataacaac
aaatctgtgaatgagtctctgaacaaccttttcattacagaagaagactaccaggcactg
cgcacgtccatagatgcctatgacaactttgataacatttctctggctcagcgtttggag
aaacatgagttgattgaattcagaagaattgctgcctaccttttcaaaggcaacaaccgt
tggaaacagagtgtggaactgtgcaagaaggatcgactctacaaggatgctatgcagtat
gcctcagaatcaaaggacacagaactggcagaagaactgctgcaatggttccttcttgaa
gagaagagagaatgttttgctgcttgccttttcacctgttatgaccttctcaggccagat
gtggttttagaaactgcttggaggcacaatatcatggactttgccatgccctatttcatt
caggtcatgagggaatacttgtcaaaggtggataaattggatgcttctgagtccctgagg
aaagaggaggaacaggctacagaaacacagcctattgtttatggacaaccacagctgatg
ttgacagcagggcccagtgtgccagttcccccacaggcaccttttggctatggttatgct
gctgctccttatgggcagccacagcctggatttggatacagcatgtaa
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