Geotrypetes seraphini (Gaboon caecilian): 117349054
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Entry
117349054 CDS
T09159
Symbol
TRPV1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117349054 (TRPV1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gsh04040
]
117349054 (TRPV1)
Ion channels [BR:
gsh04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
117349054 (TRPV1)
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Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_3
Ank_5
Ank_4
PP-binding_2
Motif
Other DBs
NCBI-GeneID:
117349054
NCBI-ProteinID:
XP_033777844
UniProt:
A0A6P8P2N3
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Position
15:38092864..38134045
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AA seq
558 aa
AA seq
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MLNLKNGKNDTIPLLLEVAEKTDNLKEFINSAYTDNYYRGQTALHIAIERRNMYLVELLI
QRGADVHAKADGEFFIKAKGRPGFYFGELPLSLAACTNQINIVKYLLMNPYQPARITEQD
SMGNTVLHALVEVADNTKENTKFVVQMYNDILILGAKISPTVRLEEIQNKNDLTPLTLAT
KTGKIGVLAYILRREIKEPECSHLSRKFTEWAYGPVHSSLYDLSSVDTYERNSVLEIIAY
SSETPNRHDMLQVEPLNKLLQNKWDRFVKRIFYCNFLIYLTYVIIFTISAYYRPIKGEPP
FPLEHSTRAYLRYSGELITVLGAVYFFFRGIQYFLIRRPSMKTLFIDSYSEVLFFIQSLF
LLTSLVLYISGRQEYVGIMVLCLALSWSNLLYYTRGVQQMGIYAVMIEKMILRDLLRFMF
VYIVFLCGFATALVILLEDGEDTVDRCSCSNPGRRGTGRSLSQSYNNLYFTCLELFKFTI
GMGDLEFTENYKFKIVFYLLLVLYVILTYILLLNMLIALMGETVNKIAQESKNIWKLQVL
PTRFFCWGKSCDLGVRIQ
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatctgaaaaatggaaaaaatgacaccatcccactgctgttggaagtggcagaa
aagacggataacctgaaggaatttatcaattcagcatacacagacaactactacagggga
cagacagcactacatatagccattgagagaaggaatatgtacctggtggagcttctgata
cagcgtggggcagatgtccatgccaaggcagatggagagttcttcatcaaagcaaaagga
agacctggcttttattttggtgagcttcctctctctctggcagcctgcaccaatcaaata
aacatagtgaaatacctgctgatgaatccataccagcctgctcgtatcacggagcaggac
tcaatgggcaacacggtcctgcatgcgctggtggaagtggcagacaacaccaaggagaac
accaagtttgtggttcaaatgtataatgacattctaatcctgggtgcaaagatcagccca
acagtgaggctggaagagatccagaacaagaatgacctgacccccctcaccctcgctaca
aaaacaggcaagataggggtattggcatatattctcaggagggagattaaggagcctgaa
tgcagccacctgtctcgcaagttcacagaatgggcctatgggccggtgcactcctctctc
tatgacctgtcttctgtagatacttatgagaggaactcagtgcttgagatcatcgcttac
agcagtgagactccaaaccgccatgacatgctgcaggtggagcctctgaacaagctgctg
cagaataagtgggatcgttttgtgaaacgcatcttttattgtaacttcttgatatatctc
acgtatgtgatcattttcacgatatctgcctattacaggcccatcaaaggggagcctccc
ttccctttagagcatagcactcgggcctacctgcgatacagcggagagttgataactgtc
ctgggagccgtctatttcttcttcagagggattcaatatttcctaatcaggcgtccttcc
atgaagacattatttattgacagttacagtgaggttctcttcttcatccagtctctcttc
ctcttgacctctctggtgctgtacatatctggtaggcaggagtatgtgggcatcatggtt
ctgtgtcttgcactgagctggtcaaacctgctgtactacactcggggtgtccagcagatg
gggatttatgcagttatgattgaaaagatgatcctcagagatttactgcgttttatgttt
gtctacattgtctttctctgcggattcgcaacagctctggtcattctacttgaggatggg
gaagatactgttgacagatgctcttgctctaacccagggagacgtggcaccggcagatcc
ctgagccagtcctacaataatctgtacttcacctgtctagagctcttcaagtttactatt
ggaatgggggacctggaattcacagagaattataagtttaagatcgtcttctacctgctg
ttagtcctgtatgttattctgacctatattttactgctcaacatgttgatcgcattgatg
ggggaaactgtgaacaagattgctcaagaaagcaaaaacatttggaaacttcaggtattg
cctactaggtttttttgttggggcaagtcatgtgatttaggggttagaattcagtaa
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