Geotrypetes seraphini (Gaboon caecilian): 117349864
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Entry
117349864 CDS
T09159
Symbol
PELP1
Name
(RefSeq) proline-, glutamic acid- and leucine-rich protein 1 isoform X1
KO
K16913
proline-, glutamic acid- and leucine-rich protein 1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gsh03009
]
117349864 (PELP1)
Ribosome biogenesis [BR:
gsh03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
117349864 (PELP1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PELP1_HEAT
RIX1
Motif
Other DBs
NCBI-GeneID:
117349864
NCBI-ProteinID:
XP_033779393
UniProt:
A0A6P8PX50
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Position
16:17166633..17248148
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AA seq
1182 aa
AA seq
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MAAVATHEVWEQLVESVSGLLRRGDRPGATTPAPLLLLPGLVRGLREHGGLRAQSSTAIG
GLTGISSARLNSIKTRFEGLCLLSLLAAESPTDHFQQHCVSWLRSVQHIIQSQDLPPTME
LAVLVLHDLLKYSSLLPALSREISMNLIPGLLTSLLDLKPECQAPALEGMKACMTFYPRA
CGSLRGKLASFFMNRLETESPQIQQLACECYTLLPSLGSGFAQGVKHTECWEHQLQCLLA
TLHATVGQLYEGAETELLHYEGAGVELLPPVADDGEALHVLRLKHRFSGICKCLCLLLSS
SFSVPVTVPVQDVLDAICRVLSISSKNISWLGDGPLKTLLLPSVHAEVLDLLAALILACG
SRLVRFAGLFCRLFAQVLTLWSGKRDDIIPGQEKPYSAVRTKVYQVLEMWIKVCGASSGV
LQGPGHHCDVLLAHLTSDISPPSDTIKLRVGRLGAEISLNNGKPGSKKQKMDLGDGSQLQ
SHRKQDVNANSDTCIMALRVLSRAILLCGTLIKEDTHRRLHELVMPLLIRLQQSALPTTS
PYTSSECRKELYRLLLCLLLTPHPRWPPPLHCAVCIFSQGQKENNMKVSSFCAEALVICN
CIVHPRVPSLQLPVTSSATNTAATDLLKSSVLGADMPSTFRHSPAPTSLRSQTNHLTIPL
QGLASGQPLASRLQSSMVSNLTLPSVPPCTVGVENHQLDEHMEVESRVHSMPSPSEETFG
GKTHRPVFIHYEKEEASDVEISLDSDSDDSVVIVPEGLLPKQTLSPPTKVVEEAEESSKE
HAITVTVATTVNATISVPASPASSNQILAPTAALPPPPPPLPPPPPPPLQLVAETPASAV
EEDLTVINLNSSEEEEEEEEEEEDFAEDEYFDDEEDFEEEEYDGEMMDEEEEEDEEGEGQ
LSLDAIDMDEEEDLDDLEEDLECEDEVMTEEEEEEEEDEEDIMPCIEEEPEEELRVGFVE
KEALETEGEPAAQADSEAREEKSGAGEQIDESPPRLSPVREGTQEAKEEEEVATEADTDL
LMTVESDSAEREEEEEEEVKETPLLVQETQTPQLPEETSPPPPPPPPPPPPPSSPPPPPP
PPPPPLPPPLPPPLPTESEECEKIQMEERSDQEVETSPAQTSTEERIGELVTEKDIKPDK
EEETPQSTEKKAEAEIDDTAAMLADFIDCPPDEDKTSPDISS
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgtggccacacatgaggtgtgggagcagctggtggaaagcgtatccggtctc
cttcgccgcggggaccggcctggcgctacgaccccggctcccttgctcctgctgccaggg
ttagtgcggggtttacgggagcatggggggcttcgggcacagagctctacagccattgga
ggcctgactggaatcagcagtgctcgtctgaattctatcaagacgcggtttgaaggattg
tgtcttctttcgctgcttgcggcggaaagtccaacggatcattttcagcagcactgtgtg
tcctggcttcggagtgtccagcatattatacaatctcaagacctaccaccaacgatggag
ctggctgtgcttgtcctgcatgacctcctgaaatattcctcattgcttcctgctctgtcc
cgagaaatctcaatgaatctcattccaggacttctcacctctctgctagacctcaagcct
gagtgccaggctccagctttggaaggaatgaaggcatgtatgaccttttatccccgagcc
tgtggctctttgcgggggaagttagcctccttttttatgaatcgactggaaacagaaagc
ccccagatacagcagctggcatgtgagtgctacaccctccttccttctctgggctcggga
tttgcacagggggtgaaacacacggagtgctgggaacatcagttacagtgtctcctggca
acattgcatgccacagtaggtcagctttatgagggagcagagacagaactacttcattat
gagggtgctggggtggagctgctgcctccagtagcagatgatggggaggcccttcatgtg
ctgcgtctaaagcatcgattctctggcatctgcaaatgcctctgtctgcttctcagctcc
agcttttcagtgcctgtgactgttcctgttcaggatgtcctagatgccatttgcagagtt
ttgagcatcagcagcaaaaatattagctggctgggggacgggcccctgaagacgctgctg
ctaccatctgtccatgcagaggtactggatctgctggctgcgctcattttggcgtgtggc
agtagactggtgcgcttcgctggcttgttctgtaggctgtttgcacaggttttgacgctg
tggagtggaaaaagagatgacatcatacccggccaggaaaagccttacagtgctgtgcga
acaaaagtttaccaggtgttggagatgtggatcaaggtgtgcggagcttcgtctggagtt
cttcagggacctggtcaccactgcgatgtgcttctggctcacctcaccagtgatataagt
cctccctcagacaccatcaagctaagggtaggacgtttgggtgctgaaatctcgttgaat
aatgggaagccaggaagcaagaaacagaagatggatttgggagatggctctcagctgcag
agccaccgcaaacaagatgttaatgcaaacagtgatacgtgcattatggctcttagagtg
ttaagccgggcaatcctgctgtgtgggactttaataaaagaagatacacataggaggctc
catgagcttgtcatgccattgctgatacgcttacagcagagtgctcttccaacgactagt
ccgtataccagctctgagtgcaggaaggagctgtatcgcttgctgctttgtctcctgctc
actcctcacccacgatggccacctccccttcactgtgccgtctgcatcttcagccaaggt
cagaaggagaacaacatgaaggtttcttctttttgtgctgaggctttggtgatctgtaat
tgtattgtccacccgcgagttccatctcttcagctcccagtcacgagctctgctaccaat
actgctgcaacagaccttctgaaatcctctgtgctgggagcagacatgccatccactttc
cgacacagcccagctcccacttctctgcgttcccagaccaaccacttgaccattcccttg
cagggattagcatcggggcaacctctggcatcacgcctgcagtcttccatggtatccaac
ctgacgttgccttctgttccaccttgcaccgttggcgttgagaaccatcagttagatgaa
catatggaggtggagtcacgagttcatagcatgccctcacccagtgaggaaacctttggt
ggaaagactcatcgtcctgtcttcatccattatgagaaggaagaggcgtcagatgtggaa
atctctttggacagtgactctgacgatagcgtggtgatcgtcccagagggactgctacca
aaacagaccctatctccacccaccaaggtggttgaggaggccgaagagtcatccaaagag
cacgctatcactgtcactgttgccaccacagtaaatgcaacaatttctgttccagcttca
cctgcatcatctaaccaaatccttgctcctactgcagctcttccgcctcccccgccaccc
ttacctccaccacccccaccacctctgcagcttgtggcagaaactccagcctcggcagtt
gaagaggatctcactgtgatcaacctcaacagcagtgaggaggaagaggaggaggaggag
gaggaagaggactttgctgaagatgaatactttgatgatgaggaagactttgaagaggag
gaatatgatggtgagatgatggatgaggaggaggaagaagatgaagaaggtgaagggcag
ttaagtctagatgcaatcgatatggatgaggaggaagacttagatgaccttgaggaagac
ttagaatgtgaagatgaagtgatgacggaggaagaagaggaagaggaggaggatgaggaa
gacataatgccgtgcatagaagaggagccagaggaagaactgcgtgttggctttgtggaa
aaggaggcactagagactgagggggagccggcagcacaagctgattctgaagcaagggaa
gagaagtcaggagctggagagcagatagatgaatctccccctagattgtctccagtgcga
gagggcacacaggaggcaaaggaagaggaagaggtggctacagaagcagacacagactta
cttatgacagttgaaagtgatagtgcagagagggaagaggaagaggaggaggaagtgaag
gagaccccactccttgtacaggagacacagacaccccagttaccagaggagacaagtccc
cctcccccaccgccgccgccgccaccaccgccaccttcctcaccccctcctccacctcct
ccccctcctccaccccttcctccacctcttccccctccccttccgacagaatctgaggaa
tgtgaaaaaatccaaatggaagaaaggtccgaccaggaagtcgaaacatctccagcacag
acatctaccgaagaacggataggggagcttgtgactgagaaggatataaaaccagacaag
gaggaggagaccccacagagcactgagaaaaaagctgaggctgagattgacgacacggca
gccatgcttgctgacttcatagattgtcctcctgatgaagacaaaacatcccctgatatc
agctcatag
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