Glycine soja (wild soybean): 114383285
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Entry
114383285 CDS
T06057
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1-like isoform X1
KO
K14962
COMPASS component SWD2
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114383285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114383285
03036 Chromosome and associated proteins [BR:
gsj03036
]
114383285
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
114383285
Chromosome and associated proteins [BR:
gsj03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
COMPASS/SET1 complex
114383285
COMPASS/SET1 complex (yeast)
114383285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
NBCH_WD40
PQQ_2
Cytochrom_D1
Nup160
Motif
Other DBs
NCBI-GeneID:
114383285
NCBI-ProteinID:
XP_028198717
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Position
14:complement(10660053..10664846)
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AA seq
334 aa
AA seq
DB search
MGGTQVEREEKVSLELCEEILQSMEVGMSFKDYNGRISSLDFHRASNYLVTASDDESIRL
YDVTSGTCLKTINSKKYGVDLVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGH
HDRVVSLSLCSRKDCFISGSLDRTVLLWDQRAEKCQGLLHVQGRPAISYDDQGLVFAIAF
GGYIRMFDARKYEKGPFEIFSVGGDISDANVVKFSNDGRLMLLTTADGHIHVLDSFRGTL
LSTYIVTPISCNSTLEASFSPEGMFVISGSGDGSIYAWSVRSGKEVASWRSATSDTGPPV
IKWAPGSLMFATGSSELSFWVPDLSKLGSYVGRK
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgggagggacacaagtggagagagaagagaaggtgtctctggaactctgtgaagaaatt
cttcagagtatggaagtgggaatgtccttcaaagactataatggtagaataagttcgttg
gattttcacagggcatccaattatctagtaactgctagtgatgatgaatccattcgtctg
tatgatgttaccagtggaacatgtttgaagacaattaatagcaagaagtatggagttgac
ctggtttgcttcacatctcatcctacaactgtcatttactcttcaaaaaatggttgggat
gaatctttgcggcttctatcgttgcatgataacaaatatttgagatatttcaaaggtcac
catgacagggttgtgtctctaagtttgtgctctcggaaagactgctttatatctggatct
ctagatcgaactgttttactgtgggatcaaagggctgagaagtgccagggacttttacat
gtacaaggaaggcctgctatatcatatgatgatcaagggcttgtctttgcaattgccttt
ggaggatacataagaatgtttgatgctcgcaagtatgaaaagggtccctttgagatattt
tctgttgggggagatatttctgatgcaaatgttgtgaaatttagtaatgatgggagactc
atgcttttaacaacagcagatgggcatattcatgtgcttgactcatttcgtggcacactt
ttatccacatatattgtcacacctatctcatgcaactccacattagaagcttcttttagc
cctgagggaatgtttgtaatatctggttctggggatggcagcatctatgcatggagtgtt
cgaagtggcaaagaagttgcaagttggaggagtgcaacttctgatactggacctcctgta
ataaagtgggctcctggaagtcttatgtttgctacaggatcatctgagttgtcattctgg
gttcctgatttgtctaaattgggatcttatgttggaagaaagtag
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