Glycine soja (wild soybean): 114395936
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Entry
114395936 CDS
T06057
Name
(RefSeq) PH, RCC1 and FYVE domains-containing protein 1-like isoform X1
Organism
gsj
Glycine soja (wild soybean)
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Gene cluster
GFIT
Motif
Pfam:
RCC1
RCC1_2
BRX
BRX_assoc
BRX_N
FYVE
PH_12
ATG16
Tropomyosin
LRS4
Crescentin
Mcp5_PH
PH
Motif
Other DBs
NCBI-GeneID:
114395936
NCBI-ProteinID:
XP_028213606
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Position
18:14720152..14740243
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AA seq
1107 aa
AA seq
DB search
MSRTDTMTTSDLNRTGPVERDIEQAITALKKGAYLLKYGRRGKPKFCPFRLSNDESILIW
FSGKEEKRLKLTNVSRIISGQRTPIFQRYPRPEKEYQSFSLIYNDRSLDLICKDKDEAEV
WFSGLKALISRSHHRKWRPESRSDGIPSEANSPRTYTRRSSPLNSPFGSNESLQKDSGDH
LRLHSPYESPPKNGLDKAFSDVIYYPIPPMGFFPPDSASGSLHSVSSGGSDSMHGQMKTM
PMDAFRVSLSSAVSSSSQGSGHDDGDALGDVFIWGEGMGDGVLGGGVHQVGSNFGVKMDS
LLPKALESAVVLDVQNIACGGKHAALVTKQGEVFSWGEESGGRLGHGVDSDVPHPKLIES
LSNTNIELVACGEYHTCAVTLSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNGPLEGIH
VSSISCGPWHTAVVTSSGQLFTFGDGTFGALGHGDRKSVSLPREIESLKGLRTVQAACGV
WHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTCVVTLDEHNFCQV
ACGHSMTVALSRSRHVYTMGSCVYGQLGNTQADGKLPIRVEGKLSKSFVEEIACGAYHVA
VLTSRTEVFTWGKGANGRLGHGDTNDRNTPTLVEALKDKQVKSIACGTNFTAAICLHKWV
SGVDQSMCSGCRVPFNFKRKRHNCYNCGLVFCHSCSNKKSVKASMAPNPNKPYRVCDNCF
NKIRKTTETDSSSQSSMSRRGSLNQGWSLQFNGKDDKLDSRSHNQLARFSSMESLKQVDS
RSSKKNKKLEFNSSRVSPAPNGGSQWGAMNISKSFNPGFGSSKKFFSASVPGSRIVSRAT
SPISRRPSPPRSTTPTPTLGGLSSPKMVVDDAKRINDNLSQEVVKLRSQVENLTRKAQLQ
EVELERTTKQLKEAIAIASEETAKCKAAKEVIKSLTAQLKDMAERLPVGASRNVRSPPSL
ASFGLNPGSNDLTNASFDRLNIQATSPESDSTGSTNQILSNGSSTITNRSAGHIKHSQSD
AISRNGNKTKDNETEWVEQDEPGVYITLTSLPGGVIDLKRVRFSRKRFSEKQAEQWWAEN
RARVYEQYNVRMIDKSTIGVGSEDLAH
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgcactgatacgatgacgacttcggatcttaatagaactggtcccgtggaaaga
gacattgagcaggctattactgctttaaaaaaaggggcttacttgctcaagtatggaagg
agagggaagcccaagttttgtccctttcggctttccaatgatgaatctattttgatatgg
ttctcagggaaagaagagaagcgccttaaactaactaatgtttctaggattatatctgga
caacgcacgccaatctttcaaagatatccgcggcccgagaaggagtaccagtcattttct
ctcatttacaatgatagatcattagacttgatttgtaaggataaagatgaagctgaggtt
tggttcagtggattgaaagcgttaatttctcgcagccatcaccggaagtggagaccagag
tcaagaagtgacggtattccatctgaagctaatagtcctcgaacatacactagaagaagt
tctcccttgaattctccttttggtagtaacgaaagcttgcaaaaggacagtggggatcat
cttcgccttcatagcccatatgaaagcccccctaagaatggtttggataaagcattttct
gatgtgatttattatcctattcctccaatgggtttcttccctccagattctgccagtggt
tcgctccactctgtgtcatcaggaggatcagatagcatgcatggtcaaatgaagacaatg
cctatggatgcttttagagttagcctatcaagtgctgttagctcatctagccaaggttct
ggtcatgatgatggtgatgccttgggggatgttttcatttggggggaaggcatgggtgat
ggtgtattgggtggtggggttcaccaagttgggagtaattttggtgtcaaaatggattct
ctgttgcctaaagccttggaatcagcagtagttcttgatgtgcagaatattgcttgtggt
gggaaacatgctgccttggtgaccaaacaaggtgaagttttttcctggggggaagaatca
ggaggaaggcttgggcatggagttgattctgatgttcctcatccaaagcttattgaatct
ctaagtaatacaaatattgaacttgtagcttgtggggagtatcatacatgtgctgtgaca
ctttctggtgatctttatacgtggggtgatggcacttacaattatggtcttctggggcat
ggaaatcaggtgagccactgggtcccaaaaagagtaaatggccctttggagggcatacat
gtttcatctatttcttgtggtccatggcacactgctgttgttacctcttcggggcaatta
tttactttcggcgatggtacatttggtgctctgggtcatggagaccgaaaaagtgtttcc
ttgcctagggaaatagagtccctgaagggtcttcgtactgtgcaggctgcttgtggtgtt
tggcatactgctgctgttgtggaggtcatggttggaaattcgagttccagcaactgctct
tcagggaagctgtttacatggggtgatggagacaaaggtcgacttgggcatggtgacaag
gaatcaaaacttgttccaacctgtgttgtgactcttgatgaacataatttttgtcaagtt
gcttgtggtcatagtatgactgtagcactttctagatcacgccatgtctatacaatgggc
agttgtgtctatggccagttaggaaatactcaagctgatgggaagctaccaatccgtgtt
gaaggaaagctttcaaagagttttgtggaggagatagcttgtggtgcatatcatgttgca
gttttaacttcaaggactgaagttttcacgtgggggaagggtgcaaatggtcgtttaggc
catggggatactaatgatagaaacaccccaacattagtagaagctctgaaagacaaacaa
gtaaaaagtattgcttgtggtacaaatttcactgcagccatatgcctgcataagtgggta
tctggtgttgaccagtccatgtgttctggctgccgtgtgccattcaatttcaaaaggaaa
cgccacaattgttataactgtggacttgttttttgtcattcatgcagtaataagaaatct
gttaaggcttcaatggcaccaaaccccaacaaaccttatcgtgtctgtgataattgtttt
aataaaataaggaaaactacagaaactgattcttcatctcagtcttctatgagcagaaga
ggaagtcttaatcaggggtggtcacttcagtttaatggtaaggatgataaattggattcc
agatctcataatcaacttgccaggttttcttcaatggaatccttgaaacaagtggacagc
agatcttcaaagaaaaacaaaaaattggaattcaacagtagccgtgtctcacctgctcca
aatggtggttcccagtggggagcaatgaatatttctaaatcttttaatcctggttttgga
tcatcgaagaagtttttttcagcttctgttcctggatctagaattgtttcccgggcaaca
tccccaatatctagacgacctagtccacctcgttcaactactccaaccccaacactgggg
ggactttcatccccaaagatggttgtggatgatgctaagagaatcaatgataacctcagt
caggaggttgttaaattaagatcgcaggtggaaaacctgactcggaaagcccagcttcaa
gaagttgagttggaaagaacaactaaacagttgaaagaagcaatagcaattgcaagcgaa
gaaactgccaaatgcaaagcagcaaaggaagtgatcaagtcactcactgcgcagttgaag
gacatggctgagaggctacccgtaggagcatccaggaatgtcagatcgccaccctctctt
gcttcctttggcttaaatcctggttccaatgaccttactaatgcttccttcgatcgattg
aatatacaagcaacaagcccagaatcagactcaactggatccactaaccagatactttca
aatggatcaagcaccatcaccaaccggagtgcaggtcacattaaacacagtcaatcggat
gcaattagcagaaatggtaacaaaacaaaggataatgagactgaatgggttgagcaagat
gaacctggtgtatatattactcttacctccctaccaggaggagtaatagatcttaaaaga
gttcgcttcagtcggaagcggtttagtgagaaacaagcagaacaatggtgggcagagaat
cgggcaagagtatatgaacaatacaacgtgcgcatgattgacaagtcgacaattggtgtt
gggagtgaggacctggctcattga
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