Glycine soja (wild soybean): 114396616
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Entry
114396616 CDS
T06057
Name
(RefSeq) DNA ligase 6 isoform X1
Organism
gsj
Glycine soja (wild soybean)
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DRMBL
DNA_ligase_A_C
RMMBL
Lactamase_B_2
UBA_4
Motif
Other DBs
NCBI-GeneID:
114396616
NCBI-ProteinID:
XP_028214491
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All DBs
Position
18:complement(56829944..56842628)
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AA seq
1402 aa
AA seq
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MDSQTLDSTKLYLTALKTLQSEAPPTPSLPPLPSSIPHSKLIPHTRFLVDAFRHAGPHSH
SYFLSHFHSDHYSGLSPSWSRGVIFCSHTTAALLRRILHIPAAFIVPLPLRQPLRIDGAH
VTLLDANHCPGAVQFLFSVPRATADAAALRYVHTGDFRFCNSMVSEPALAPFVGADAVFL
DTTYCNPKFVFPSQEESIDYVASVVESVERECEHNSSDKVLFLVATYVIGKEKILLELAR
RFKRKIHVDARKMEVLRVLGYGENGEFTEDGKESNIHVVGWNLLGETWPYFRPNFVRMKE
VMAERGGSYSKVVGFVPTGWTYEVKRNRFAVKSKDLFKIHLVPYSEHSNYDELREYVKFL
KPKRVVPTVGLDVEKSDSKHADKMRKYFARLVDETANKQDFLRGFLRDPGEKGEAGFKAE
KVVSDALGPGQDMEEEEINALKKTEGDMGIGPVVAVGLSSFMEETYAQDPTLLNDEEKEK
IIQELTFCLPTWVTRNQLLDLISISGSNVIEAVSNFYERETEFHEQVISCQTPVSTSKCC
SLNGMDSLAKPCLNTNNTGKNIDIFPSQDSKLTNLRHTVPSPISPAKRKRSTDSKQNKKA
KVKAKSEPSGSKQATITRFFSKVIPEMPGGTQSDNSEPKLDQSSKVEDLLPTDDGQMYKD
EIDQFMQIINGTESLKKYAITIIEKTKGDINKALDIYYGNSENLGEKQISVQVESKIDRP
VVKKHASEELRIVPDIFDQKVLKDNVDATHLSLPPEKYNPKEHACWRDGQPAPYLHIART
FNLLEGEKGRIKATSLLCNMFRSLLALSPADVLPAVYLCTNKIAADHENKELNIGGSLVT
AALEEACGTNRLKIREMFNKFGDLGDVAQECRQTQRLLAPPTPLLIKDVFSALQKISVQT
GSRSTSRKKGIIVHLMRSCREKEMKFLVRTLVRNLRIGAMLRTVLPALAHAVAMNSCPTL
HQEGTAENIKEKLQVLSMAVVEAYNILPNLDLIVPSLMNQGIDFSVSSLSMVPGIPIKPM
LAKITNGIPQALKLFENKAFTCEYKYDGQRAQIHKLVDGSIRVFSRNGDESTSRFPDLID
IIKESSKPVASTFIMDAEIVGIDRKNGYRIMSFQELSSRGRGGKDTLVTSESIKVDICIF
VFDIMFANGEQLLGFPLRLRRKYLKDLFYDEKPGYFEYAKETTVEADDACLTCEATLTKI
NAFLEDALRSSCEGIMVKTLDVDAGYSPSKRSDKWLKVKRDYVEGLNDTLDLVPIGAWHG
NGRKAGWYSPFLMACFNPETEEYQSVCRVMSGFSDSFYIEMKQFFSGDKVLSKKPPYYQT
REAPDMWFCPQVVWEIRGADFTVSPVHHAAIGLVHPSRGISIRFPRFISCVSDRSPEECS
TAADIGEMFHSQTRKMDITAGD
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atggattcacaaaccctagactccaccaaactctacctcaccgccctcaaaaccctccaa
tccgaagcccctcccacaccctccctccccccactcccctcttccatccctcactccaaa
ctcatcccccacacccgcttcctcgtcgacgccttccgccacgccggcccccactcccac
tcctacttcctctcccacttccattccgaccactactccggcctctccccctcctggtcc
cgcggcgtcatcttctgctcccacaccaccgccgccctcctccgccgcattcttcacatc
cccgccgcattcatcgtccccctccccctccggcagcctctccgcatcgacggcgcccat
gtcaccctcctcgacgccaaccactgccccggcgccgtccagttcctcttctccgtcccc
cgtgccaccgccgatgccgccgccctcaggtacgtccacaccggcgattttcgcttttgt
aattccatggtttccgaacccgccctcgcccccttcgtcggtgccgatgcggtgtttctc
gacaccacctattgtaatcctaagttcgtgttcccctcgcaagaggagtctattgattac
gttgccagtgtcgtggagagcgttgagcgtgagtgtgagcataatagtagtgacaaagtt
ttgtttcttgttgctacttatgtcattgggaaggagaagattttgcttgagcttgcacgc
aggtttaagaggaagatacacgtcgatgctaggaagatggaggttttgagggttcttggg
tatggggagaatggtgaatttactgaggatgggaaggagagtaatattcatgttgttggg
tggaatttgttgggggagacttggccttactttaggcctaattttgttaggatgaaggag
gttatggctgagagaggggggtcatactccaaggttgtcggctttgttccgaccggatgg
acctatgaagtgaagcggaataggtttgcggtcaagtccaaggatttgttcaagattcat
cttgtgccgtatagtgagcactcaaactatgatgagctcagggagtatgtgaagtttttg
aagccaaagcgggttgttccgaccgtgggtttggatgttgagaagagtgacagtaaacat
gctgacaaaatgaggaagtactttgctaggttggttgatgagactgccaacaagcaggat
tttttaaggggttttcttcgtgaccctggtgagaagggtgaagcgggtttcaaggctgag
aaggttgttagtgatgctcttggaccagggcaagacatggaggaagaagaaatcaatgca
ttgaagaagacagaaggtgatatgggtattggtccagttgtggctgtgggtttgtcttct
tttatggaagaaacttatgcacaagatcctactttgctgaatgatgaagaaaaggagaaa
ataattcaagaactgactttttgtttgcccacatgggtcacccgaaaccagttgttggat
ctgatcagcatctcagggagcaatgtcattgaagctgtttctaatttctatgaacgtgaa
actgaatttcatgagcaagtgatatcttgtcaaactcctgtttcaacatccaagtgctgc
tcattaaatggtatggattcacttgcaaaaccatgcctcaatacaaacaacactggcaaa
aatattgacatttttccaagtcaagactctaaattaactaacctgaggcatacagtgcct
agtcccatttctcctgccaaaaggaagagaagtactgacagtaagcaaaacaaaaaagcc
aaagtcaaagcaaaatctgaaccaagtggttcaaagcaggccacaattacaagattcttc
agtaaagtaatacctgagatgcctggtggtactcaatctgataattctgaaccaaagctt
gaccaaagctctaaagttgaagacttgttgccaactgatgatggacaaatgtacaaggat
gaaattgatcaatttatgcaaataataaatgggactgagtcattaaaaaaatatgccatc
actataattgagaagacaaaaggtgatatcaataaggcattggacatatattacggtaat
tctgaaaatcttggtgaaaagcaaatatcagttcaagtggagagcaaaattgatagacct
gtagtgaagaagcatgcatcagaggaattgagaattgtacctgatatttttgaccagaaa
gtcttgaaagataatgtagatgctactcacttatctctaccacctgagaaatacaaccct
aaagagcatgcgtgttggagagatggacagcctgcaccatatttacatattgcaagaacc
ttcaacctgcttgagggtgagaaaggaaggattaaagctacatcattgctatgcaatatg
ttcagaagtttgttggccttatctccagcagatgtgcttcctgctgtgtatctatgcact
aacaaaattgctgcagaccatgaaaataaggaactgaatattggtggaagtttagtcact
gcagcacttgaagaggcatgtggaacaaatcgattgaaaataagggagatgtttaacaaa
tttggtgatcttggtgatgttgcacaagagtgtcgtcaaacacagagattgcttgcacca
cctacaccacttctaattaaggatgttttctctgcactacaaaagataagtgtacaaaca
ggcagtcgaagcacatctcggaagaaaggcatcattgttcatctcatgcgttcctgccgt
gagaaggagatgaagtttcttgttcggaccttggtcaggaacctaaggattggggcaatg
cttagaactgttttgcctgcattggctcatgctgttgctatgaattcttgccctactttg
caccaagaaggaactgcagaaaatataaaggagaaactacaggttctttctatggcagtt
gttgaagcatataacatactgccaaatttagatctcatagttccatctctcatgaaccaa
ggcattgatttttcagtttcaagtttatcaatggttccaggaatccctattaagcctatg
ctagcaaagatcaccaatggtattccccaagcattgaagctatttgaaaataaagcattt
acatgtgaatataagtatgatggtcagcgagctcaaattcacaaattagttgatggatca
attcgtgttttttcaagaaatggggacgaatcaacttcaagatttcctgatctgattgac
ataattaaggaatccagcaagccggttgcatcaactttcataatggatgctgaaattgtt
ggtattgacagaaaaaatggatataggattatgtctttccaggagctatcttcacgtgga
agaggtggcaaagatacattagttacttcagagagcattaaggtggatatttgcatcttt
gtctttgatatcatgttcgcaaatggagagcagttattgggttttcctctccgccttaga
cgaaagtatctgaaggatttgttctatgatgagaaacctgggtattttgaatatgcaaaa
gaaacaactgttgaagcagatgatgcttgcttaacctgtgaagccacattaactaagata
aatgctttcctggaagatgctcttcgctcttcatgtgaaggaattatggtgaaaacattg
gatgttgatgctgggtattctccatcaaagcgttctgacaaatggctaaaagtcaagcga
gattatgtggaaggattaaatgatactcttgatttagtaccgattggtgcttggcatgga
aatggaaggaaagctggatggtatagtccatttcttatggcatgtttcaatcctgaaaca
gaggagtatcaaagtgtatgtcgtgtgatgtctggattctcagattcattttacatagag
atgaaacaattcttctctggggacaaagtcttgtccaaaaaaccaccatattatcaaaca
agagaggcaccagacatgtggttttgtccacaagttgtttgggaaataagaggagcagat
tttactgtatccccagttcatcatgctgccattggtttagttcatccatctcgaggcatc
tcaatcagatttccaagatttattagttgtgtctcagacagaagcccagaagaatgtagc
acagctgccgatataggtgaaatgtttcattctcagactcggaagatggatatcacagct
ggagactga
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