Glycine soja (wild soybean): 114409909
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Entry
114409909 CDS
T06057
Name
(RefSeq) lysine-specific demethylase REF6-like
Organism
gsj
Glycine soja (wild soybean)
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Gene cluster
GFIT
Motif
Pfam:
JmjC
JmjN
zf-H2C2_2
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
114409909
NCBI-ProteinID:
XP_028229373
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Position
4:45864039..45874247
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AA seq
1591 aa
AA seq
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MVGVCEGNGEVLSWLKSMPVAPEYRPSAAEFQDPIGYIFKIEKEASKYGICKIIPPFPPS
SRKTAIANLNRSLAEAGSTFTTRQQQIGFCPRRPRPVQRPVWQSGDRYTFSEFESKAKSF
EKTYLKRHSKKGSGSGSGLGPLETETLFWKATLDKPFSVEYANDMPGSAFSPKCRHAGDP
STLADTPWNMRAVSRAKGSLLQFMKEEIPGVTSPMVYVAMLFSWFAWHVEDHDLHSLNYL
HMGAGKTWYGVPRDAAVAFEEVVRVHGYGGEINPLVTFATLGEKTTVMSPEVFISAGVPC
CRLVQNAGEFVVTFPRAYHSGFSHGFNCGEAANIATPEWLRFAKDAAIRRASLNYPPMVS
HFQLLYDLALALCSSIPASISAEPRSSRLKDKKKGEGETVIKELFVQDVLQNNDLLHILG
KGSDVVLLPHSSVDIFVCPKLRVGFQQSINVRNSEGMHSSKGFVSDDVVFSRSQGIKQEK
SFYSVKDNFTTLFERNRISSFDVNGNIRASSSNPLQRDNDRETGQGDSLSDQRLFSCVTC
GILCFSCVAIVQPREPAARYLMSADCSFFNDWVVGSGVSSNKFTIALEEATIAEPNMYTG
WMKKNVQDGIHDVSVQSSREALNTESENGNTALALLASAYGNSSDSEEDQIADESHESNV
INSASECLLSHTQDSYASPMTALDKGDDFPSTSASCEDVHRRFECNLSHQSLDHSLKKQD
YNITSGVTFENTRTVPNSTSNCSQQAHNADRSLSNKSMVAFDNKNTSMVLQADEDSSRMH
VFCLEHAAEAEQQLRPIGGAHILLLCHPDYPKIEAEAKMVAEDLGIDYMWKKIAYRHAST
EDEERIQSALDNEEAIPGNGDWAVKLGINLFYSANLSRSPLYSKQMPYNSVIYYSFGCSS
PASSPVEPKVYQRRVNRQKKVVAGKWCGKVWMSNQVHPLLAKRDSEDVEDEKLLLGWILP
DEKFERSEITLKSETTSRKSGKKRKMTAENGRPKKGSYAKKNVVADNSTEGKHNSQPRRI
LRNKKARCVERDHAALKGDYCPPYHRKSISKQANCSESDAVSDDSLDDDDHMHHRRNAIV
EKDKFIDNDVSNDTVDCDSDWQQREELSSKKVEDTERVAISEDSLDVGSLQLLRKNSRAK
HAKNISQEDIISDDQMESPLQKRQRRIPKSRQGKYLTGKDIISDDQLEHKKKKQQRKNPK
SRQAKYLNEEDIASDDQLEGHYRRYQRKNSRGRHAKCVAGEDGMPDDQLEDRCQKQQTSF
SRKRQNKGIDREVKNEISDDHLEDHFLKQHRRFPKSRQNKHTDKEVMDDLAENNSHLLHR
TPKRKQAKCMEEDDMNSDDEMEDNQPLRRTLRSKQAKPKTLQQMKQANSFQAKKQASRPI
KQGSRMLVKSKAPQQIKQPSHLRNKQSNNTQEFSLDMEEEEEGGPSTRLRKRATKAQESE
GKLKDKQTKRMKVKNAAAAKVSVGDARMQDGEAEYQCDIDGCTMSLGSKQELMHHKRNIC
PVKGCGKKFFSHKYLVQHRRVHEDERPLKCPWKGCKMTFKWAWARTEHIRVHTGARPYVC
AEPDCGQTFRFVSDFSRHKRKTGHSAKKNCQ
NT seq
4776 nt
NT seq
+upstream
nt +downstream
nt
atggtgggagtttgtgagggaaacggcgaggttttgtcatggctgaaatcgatgccggtg
gcgccggagtacaggccgagcgcggccgagttccaggatccaatcgggtacatattcaag
atcgagaaggaagcttcaaagtacggaatctgcaaaatcatccctcccttcccaccttct
tccaggaaaaccgcaatcgccaacctcaaccgctcactcgcggaagccggctccacattc
accacgcgccagcagcagatcgggttctgcccccgcaggcccaggcccgtccagcgtccc
gtctggcagagcggcgatcgctacaccttcagcgagttcgagtccaaagccaagtccttc
gagaagacatacctcaaacgccactccaagaagggctccggctccggctcgggcctgggc
ccgctggagacggagaccctgttctggaaggccacgctggacaaacccttctccgtggaa
tacgctaatgacatgcctggctcggcgttttccccgaaatgccggcacgcaggggatccc
agcacactggcggatactccgtggaacatgagagcggtttcgagggccaaaggttcgctc
ttacagttcatgaaagaggagattccgggcgttacttcccctatggtctatgttgccatg
ctcttcagctggttcgcgtggcacgtcgaggaccacgacttgcacagcttgaattacctc
cacatgggcgccggcaagacctggtacggcgtcccccgcgacgccgccgtcgctttcgag
gaagtcgttagggttcacggctacggcggagagatcaacccgctcgttacttttgctact
cttggtgagaaaaccacagtgatgtcacctgaagtatttattagtgcaggtgttccatgc
tgcaggttagtacaaaatgctggggaatttgtggtgacgtttcccagagcctatcactca
gggtttagtcatggttttaattgcggagaggcagcaaacattgcaacaccggagtggttg
aggtttgctaaagatgctgctattcggagggcttcattaaattatcctcccatggtttca
catttccagttactttatgaccttgccttagctttatgttctagtattcctgcgagcatc
agtgctgaacctcgtagttctcgtcttaaagataagaagaagggtgaaggagaaactgta
attaaagaactatttgtccaagatgtgttacaaaacaatgatctgcttcatatacttggg
aaaggatcagatgtagtacttcttcctcatagctcagttgacatttttgtttgcccaaaa
ttacgtgttggattccaacaatccatcaatgtaagaaattctgagggaatgcattcctct
aaaggttttgtttcagatgatgtggtattcagcaggagtcaaggaatcaagcaagaaaaa
agtttctattctgtgaaagacaactttactacattgtttgaaaggaacaggatttcctct
tttgatgtaaatggtaacataagggcttcaagttctaatccacttcaaagagacaatgat
agagaaactggtcaaggagattcgttatcagatcagagactgttttcatgtgtaacatgt
ggaatactatgcttttcctgtgttgctattgtacagcctagagaaccagcagctagatat
cttatgtcagctgattgcagcttctttaatgattgggttgttggctctggagtatctagc
aataaatttactattgcccttgaagaagcaactattgctgagccaaacatgtatacagga
tggatgaaaaaaaatgtccaagatggtatacatgatgtttctgttcaatcttctcgggag
gctttaaatactgaaagtgaaaatggcaatacagctcttgcattattggcttcagcatat
ggaaattcatctgactctgaggaagatcagattgcagatgagagtcacgaatcaaatgtg
ataaactctgcttcggaatgtttactttctcatactcaagattcctatgctagtcccatg
actgcacttgacaaaggagatgattttccttcaacgagtgccagttgtgaggatgtgcat
cgtagatttgagtgtaatttgagtcatcagtctttagaccactctttaaagaaacaggat
tataatatcacatcaggggttacatttgaaaatacaaggacagtgcctaattccacctct
aattgttcccaacaagctcataatgctgacaggtcattgtctaacaagtctatggttgcc
tttgataataaaaatacttcgatggtgctacaagctgatgaagactcatccagaatgcat
gttttttgtctagagcatgctgcagaagcagaacagcaacttcgcccaataggtggagcc
cacatattgctcctttgtcatccagactatcccaagatagaggctgaagcaaaaatggtg
gcagaagatctggggattgattacatgtggaagaaaattgcatacaggcacgcttccacg
gaggatgaggagaggatccagtcggctctggacaatgaggaagctattcctgggaatggt
gactgggctgtaaagctgggaatcaatctcttttatagtgcaaatcttagccgctctcct
ctttatagtaagcagatgccttacaattctgttatatactattcatttggttgtagctct
ccagcaagctcacctgtagaaccaaaggtataccaaagaagggtcaacaggcagaaaaag
gttgttgctgggaaatggtgtggcaaagtttggatgtccaatcaggtccatcccctttta
gcaaaaagagactccgaagatgttgaggatgagaaactcttacttgggtggatattacct
gatgagaaatttgagagatcagaaattaccctcaaaagtgaaactactagcagaaaatca
ggtaagaaaaggaaaatgacagctgagaatggacgacccaagaaaggaagttatgctaag
aaaaatgtagttgcagataattccactgaaggtaaacacaactcacagccaaggaggatt
cttagaaataagaaagctaggtgtgttgaaagagaccatgctgctttgaaaggggattat
tgtcccccatatcatcggaaatctataagcaagcaagcaaactgctctgaaagtgatgca
gtttctgatgattctcttgatgatgatgatcacatgcatcataggaggaatgctattgtt
gaaaaagacaaatttattgacaatgatgtttcaaacgatacagtggactgtgattctgac
tggcagcagagggaagaacttagcagcaagaaagttgaagatacagagagagttgcaatt
tcagaggattctttggatgttggttctcttcaattgcttaggaagaattccagagccaag
catgccaaaaacataagtcaagaagatataatttctgatgaccaaatggagagtcctttg
caaaagcggcaaaggagaattcctaaaagcaggcagggcaaataccttactggaaaagat
ataatatctgatgaccaactagagcataaaaagaagaagcagcaacggaagaatcctaaa
agcaggcaagccaaatacctcaatgaagaggatattgcatcagatgaccaattggagggc
cattatcgtagatatcagagaaagaattctagaggaagacatgccaaatgtgtagcaggg
gaagatggcatgcctgatgaccaattggaggatcgttgtcagaagcagcaaacaagtttc
tctaggaaaaggcaaaacaaaggcattgatagagaggttaaaaatgaaatatctgatgac
cacttggaggaccattttctgaagcagcatagaagatttcctaagagcaggcaaaacaaa
cacactgataaagaagtcatggatgacttagctgagaataattctcatctgctgcataga
actcccaaaaggaagcaagctaaatgcatggaagaagatgatatgaattcagatgatgaa
atggaagataatcagccgctgaggagaacacttcgaagtaaacaagctaaaccaaagaca
cttcaacagatgaaacaagctaattccttccaagcgaaaaagcaggcatctcggcccata
aaacagggatctcggatgcttgtgaaatcaaaggctcctcagcaaataaaacagccttct
catttgcggaataagcaatctaataacacccaggaatttagtttagatatggaagaggag
gaagaaggtggacctagcacacgccttaggaagagagccacaaaagctcaggaatctgag
ggaaaattgaaagacaagcaaacaaaaaggatgaaggtgaagaatgctgcagctgcaaag
gtttcggttggcgatgccagaatgcaggatggggaagcagaatatcagtgtgatattgat
gggtgcactatgagtttggggtcaaaacaggagctgatgcatcataagagaaacatctgc
cctgtaaaagggtgtgggaagaagtttttttcacacaagtatctggtgcagcatcgtcga
gttcatgaggatgagcgccccttgaagtgcccttggaagggatgcaagatgactttcaag
tgggcatgggctcgtacagagcacattcgagtccacactggtgcacgaccttatgtatgt
gctgagccagattgtggacaaacattcagatttgtttctgatttcagtcgtcataagcga
aagactggtcattcagcaaagaagaattgtcaatag
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