Gimibacter soli: PH603_05090
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Entry
PH603_05090 CDS
T09793
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
gso
Gimibacter soli
Pathway
gso00521
Streptomycin biosynthesis
gso00523
Polyketide sugar unit biosynthesis
gso00541
O-Antigen nucleotide sugar biosynthesis
gso01100
Metabolic pathways
gso01110
Biosynthesis of secondary metabolites
gso01250
Biosynthesis of nucleotide sugars
Module
gso_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
gso00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
PH603_05090 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PH603_05090 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PH603_05090 (rfbC)
Enzymes [BR:
gso01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
PH603_05090 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WCL55132
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All DBs
Position
complement(1050323..1050886)
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AA seq
187 aa
AA seq
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MTVEELALPGVLLFTPKRFGDDRGFFSETFSTRVFNEHVPGVTFVQDNHSLSRDVGVVRG
LHFQTPPHTQGKLVRVSRGRVLDVAVDIRKGSPTYGQHVSVELSADNWRQLWVPGGFAHA
FCTLEPDTEFLYKVTDFYAPGCDGGIAFDDPDLGIEWPIDPAKAILSDKDRKLPRLKDLD
NPFVYKG
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcgaagaactggccctgcccggcgtccttctctttaccccgaaacgctttggt
gatgatcgcggcttcttttccgagactttctcgacccgcgtgttcaacgagcatgtaccg
ggcgtgacctttgtgcaggacaatcattcgctgtcgcgcgatgtgggcgttgtgcgcggg
ctgcatttccagacgccgccgcacacacaaggcaagcttgtccgcgtttctcgtggccgg
gtgctggatgtagcggtcgatatccgcaaggggtcgcccacatacggccagcatgtatcg
gtggagctgtcggcggacaactggcgccagctttgggtgccgggcggctttgcccacgcc
ttctgcaccctcgagcccgataccgagtttctctataaggttaccgatttctacgcgcca
ggctgcgacggcggtatcgccttcgatgacccggaccttggcatcgagtggccgatcgac
cccgcaaaagcgatcctttctgacaaggacaggaagctgccgcggctgaaagacctcgac
aatccctttgtctataaaggctga
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