Gavia stellata (red-throated loon): 104254626
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Entry
104254626 CDS
T08384
Symbol
COL17A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XVII) chain
KO
K07603
collagen type XVII alpha
Organism
gste
Gavia stellata (red-throated loon)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
104254626
NCBI-ProteinID:
XP_009806753
LinkDB
All DBs
Position
Unknown
AA seq
1503 aa
AA seq
DB search
MDSVTKKTRQDGSEVTERQGGSSSGLKTSSHTGGSGVEKRSYTHGSSYVTSSGSGRLHSS
SSSSGYRQTQSPSSTLTKSPGSTFERKTYVNRHATYEGSSSANSSPEFPRKEFASASTRG
RSQSRESEIRVRLQSASPSGRWTELDDVKRLLKGSRSASCSPTRSPSSTLPIPKKAVVET
KMVTESSQSVSGTYDTTILNTALPSYMWSSTLPAGSSLGGYHNSSSLINTMSHSTGSVFG
VPNNLAPSNHTLNAGLSTSSTVFGVQNNLSPSASTLTQNATAASAAYGMKNTSQSNTMTN
ANTGVSASAGGTILSSQGDDXFLLLEKENAPAKKEMELLIMTKDSGKVFSASNTGLNGGS
FVEDTLKKEKQGFSSSYATDTGLKSDANGGLKSMPTRDKATYAEIRNGDAGGAIGSAPSW
CPCGSCCSWWKWLLGLLLAWLFLLGLLFGLIALAEEVRKLKSRVENLEKINGGLLTINQG
NSKIEKDVSRVDFLHGISPSSTFPYENEESVWLMVKNRLNKEVERGYFRGERGEPGEKGD
MGIQGPRGERGLPGVPGLXTFIVFSGPIGHQGPEGPKGQKGSMGDPGMEGPMGQRGREGL
PGPRGEPGPPGFGEKGDRGGVGEPGPPGPPGPPGSAGLKGLMGSPGPQGPPGPPGLQGFR
GEAGLPGAKGEKGATGAPGPKGDQGEKGSRGMTGEQGSRGMPGPPGEPGAKGPIGQAGRD
GQPGEKGEPGLTGMPGARGPPGPSGDAGQPGLTGPQGPPGLPGNPGRPGARGEPGAPGKV
VSAEGSSTIALPGPPGPPGPAGPTGPPGVPGPVGPAGLPGQQGPRGEKGSPGEAVIETIK
TEVSSLTSQMLADLPGRAGPPGPPGPPGESVQGPPGPRGPPGLPGPPGPPGRPGSSMSTS
ETFFTGPPGPPGPPGPKGDQGERGPRGFTGEPGEPGLSAFSSHGDRITMQGPPGVPGPPG
PPGPKGDAGVPGAPGIPGASRGGSRQIQGPPGPPGPPGPPGPGGSSSQEIQQYVTDYLKS
DNVRHYLTGAQGPPGPPGPPGVITTADGTNLDYAELAARVMSYMTSSSDRYQSFASSVST
TSVLYQELLDMLQREEIRQYLIGPRGPPGPPGPGGDGMSLSLDYDELTRRFISYLTSSGM
SIGLPGPPGPPGTPGISYSDLTAYLRNSEFSGLVGPPGPAGPPGPPGIPGSPGTSLEDVS
AYLQSVGYSSLSGVQGPPGPPGPPGPPGFSGTGLLSYADITHSDEFRSELIQYLKSDEVR
SYISGPPGPPGPRGPPGPKGDSGLVAGSLSSSYQGLRTSERLHGGSLGAEGSHGGSLGTS
SSYGSSMSSMSSYSASMGSDGSYDASMGSDGSFDGLLTEEESHRRSASSSRSYSNSFTGS
LDYNELALRVSESLQSQGILQDLMSYTAQGPAGPPGPPGPPGISRVFAAYGNVTEDLMDF
FRTYGTIQGPPGEKGERGYPGPKGDPGPMGPPGRHGHRGPKGEKGEKGEQVYVGRRKRRG
LGV
NT seq
4512 nt
NT seq
+upstream
nt +downstream
nt
atggattctgtaacaaagaaaacgaggcaagatggatcagaagttactgaaagacaagga
gggagcagcagtggactcaaaacatcatcccacactggagggagcggagtggaaaagagg
tcttacacccatggcagcagctatgtgacttcaagtggaagtggtagactgcattcgtca
tcatcatcctctggctacagacaaacccagtctcccagctctactctcaccaaatcaccg
ggctcgacatttgaaagaaaaacctatgtcaaccgccatgcaacatatgaagggagctcc
agtgccaactcttctcctgagttccccagaaaagagtttgcatctgcctccacgagaggg
agaagccaaagtcgagagagtgaaatacgagtccgactgcagagcgcgtctccctctggc
agatggacagagttggatgatgtgaaacgtttgctgaaaggaagtcgatcagccagctgc
agccctactcgatcaccgtcaagtacgctcccgataccaaaaaaggctgtggtggagaca
aagatggttactgagagctctcagtcagtgtcagggacatatgatacaaccatactgaat
accgccctcccttcatacatgtggtcctccactctgcctgctgggtcttcccttggtgga
taccataacagctcctccttgatcaatactatgtctcactctacaggatcagtttttggt
gttccaaataacctggcacccagcaatcatactctgaacgcaggcctgagcacttcctct
acagtgtttggagttcaaaacaacctgtctccaagtgcctcaaccctgactcagaatgcc
actgcagcctctgcagcatatgggatgaagaacacttctcagagcaacaccatgacaaat
gcaaatactggtgtgtctgcctcagcagggggaaccattttgagctcccagggagatgac
natttcctgctgctggagaaggagaatgccccagcaaagaaggagatggagctcttgatc
atgacaaaggacagtggcaaagtctttagtgcctctaacactgggcttaatggaggatcc
tttgtagaagacaccttgaagaaagagaagcagggattttcctcctcttacgctacagat
actggcctaaaatcggatgcaaatggaggactgaaatccatgccaacaagggacaaagca
acttacgcagaaatacgaaatggtgatgcagggggtgcaattgggtcagcaccgtcctgg
tgtccttgtggttcctgctgtagctggtggaaatggctcctgggtttgcttctggcctgg
ttgtttctccttggattgctttttggactcattgctctggcggaagaagtgagaaagctg
aagtctcgtgtggaaaacctggaaaaaatcaatggcggcctcctgacaattaaccaaggg
aattcaaaaatagaaaaggatgtttcaagggtagactttcttcatggtatttcaccctcc
tcaaccttcccttatgaaaatgaagagtcagtttggttgatggtgaaaaacagactgaac
aaggaagtagaacgaggctacttccgaggagagagaggagaacctggtgagaaaggtgac
atgggaattcaaggtcccagaggagagcgaggacttcctggtgtcccaggactctgaaca
tttattgtcttttctggtccaattgggcaccaaggaccagaaggaccaaaaggacaaaag
ggcagcatgggtgatcctggcatggaaggtcccatgggacaaagaggtcgagaagggcta
ccagggcctcgaggggagcctggaccacctggatttggagaaaaaggagatagaggtggt
gttggtgagccaggtcctccagggccacctggtcccccaggttctgctggccttaaaggt
ctgatgggttctccaggcccacaaggtcctccaggtcctcccggcctacaaggatttaga
ggagaagcaggtctcccaggtgctaaaggtgagaaaggagccactggagcccccggaccc
aaaggtgaccagggtgagaagggttctcgtggaatgacaggtgaacaaggctcaagagga
atgcctggtcctccaggagagccaggggctaaaggacctataggacaagctggccgtgat
ggacagccaggtgaaaaaggtgaaccaggtcttacgggaatgccaggagcccgaggccct
ccaggaccctctggagatgcaggacagccaggtctcacaggaccccaaggaccgccagga
ctgccaggcaacccaggccgaccaggggctagaggagaacctggagctccaggaaaagtc
gtaagtgctgagggttcgtcaactattgctctgccaggcccaccaggtcccccaggccca
gctggccccactggacccccaggtgttccaggtcctgttgggccagctggtctccctgga
cagcaaggtccacggggtgagaagggatccccaggtgaagctgtgatagaaactatcaaa
acagaagtctcatcattaacatctcaaatgctggcagatttaccagggcgagcaggacca
ccaggtccccctgggccaccaggtgaatctgtgcagggaccccctggacctcgtggcccc
ccgggattgccaggacctccaggcccaccagggagacctggatcttccatgtctacctca
gaaacattcttcacaggcccaccaggtccaccaggcccaccaggcccgaagggagaccaa
ggcgaacgaggtccacgaggattcacgggagaaccgggtgagcctggcctttcagcattc
tcctcccatggtgacagaatcaccatgcagggacctccaggagttccaggcccaccaggc
ccacctggacccaaaggtgatgcaggtgtcccaggcgctcctggaatcccgggagcatct
cgaggtggatccaggcaaattcagggacccccaggacctcctgggccacccggtcctcct
ggcccaggtggaagttcatctcaagagattcagcagtatgtcactgactacctgaaaagt
gacaacgtaaggcattatttgactggtgcccaaggcccaccaggccctccaggcccacct
ggagtcatcaccactgcagacgggacaaacttggattatgcagagctggctgcccgtgtt
atgagctatatgacaagctcttcagatcgctatcagtcatttgccagttcagtgtcaact
acatccgttttgtaccaagaacttctggacatgctgcagagagaagaaattcgccagtat
ctaattggacctcggggcccaccaggacctcctggaccagggggagatggcatgtctctg
tcactggattatgatgagctgaccagacggtttatcagctacttaacaagttctgggatg
agcatcgggctccctggaccacctgggcctccagggacacctggtatttcatatagtgac
ctgacagcatacctgcgaaactctgaattcagtggtcttgtagggccccctggtcctgca
gggcccccaggacctccagggatccccggatcacctggcacctctctggaggacgtctct
gcttacctacaaagtgtgggatactcctccctctctggagtccagggtccacctggccct
cctggccctccaggaccaccaggcttctcaggaaccggcctcctgtcctatgctgacatc
acccacagtgacgagttcaggagtgagctgatccagtacctgaagagcgatgaagttcga
agctacatctcagggccgcctgggccccctgggccacggggaccaccaggacccaaagga
gatagcggcttggtggctgggtctttatcttcatcataccaagggttacgaacttctgag
cggttgcatggaggatcccttggtgctgagggatcccatgggggatcactgggcaccagc
agctcatatggcagctccatgagcagcatgtcatcttacagtgcctcaatgggcagtgat
ggctcttatgatgcctccatgggcagtgatgggtctttcgatgggttgctgacagaggag
gaatcacacaggagatcagcaagttcaagcagatcctacagcaactccttcactgggtcc
ctggattacaacgagctggcactccgcgtgtcagagagcctacagagccaaggtattctc
caggacctgatgtcttacactgcacaaggacccgcaggtcccccaggccctcctggtccc
cctggcatcagcagggtttttgcagcctatggcaatgtcaccgaggacctcatggacttc
tttagaacatatggtaccatccaggggccaccgggtgaaaagggggagaggggttatcct
ggacccaaaggtgaccctggaccaatgggcccaccaggacgccatgggcacaggggacca
aaaggagagaaaggagagaaaggtgaacaagtgtatgttggcagaagaaaaagaagaggt
cttggggtttaa
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integrated database retrieval system
