KEGG   Geomonas subterranea: KP001_10170
Entry
KP001_10170       CDS       T07936                                 
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
  KO
K11893  type VI secretion system protein ImpJ
Organism
gsub  Geomonas subterranea
Brite
KEGG Orthology (KO) [BR:gsub00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:gsub02044]
    KP001_10170 (tssK)
Secretion system [BR:gsub02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   KP001_10170 (tssK)
SSDB
Motif
Pfam: T6SS_VasE
Other DBs
NCBI-ProteinID: QXE92850
LinkDB
Position
complement(2353579..2354976)
AA seq 465 aa
MNAARGPIFWHQGMFLQPQHFQLAERGVHSLLTPYHTLLTPHFWGVSRAEVRIVSKGLCS
IELTGGAFLFPDGTYIELPGNAIVQSRLLPQEEVWTCAPFTVYLGLRKWQEEAENATCLQ
QDDSPGMCNTRYLVASDPVSCPDLHAGGPTAEVRRLDHVLKLFWESELDLLGDYLLLPLT
RLETRGDGLHICPDFIPPCLTIAAVPLLADLVRGIRDLVAARARRLESTKKQRGVTDADF
GSKDLVYLFALRTVNRYLAQLDHLIQARAIHPWQLYGVLAQLVAELSCLSGSVTSLETSV
PDDPGILAGYNHLDLGGCFAQAHDAILKLLDQLCAGPEYAVSLSFDGNYYWADLTPAHFQ
GRNRFYLAITTEADPASVLESLASVAKLAARERLPLLMAQALPGVPLEHQPNPPQELPRR
ASSLYFAIDSRSDHWEQVRKWNNVALFWDQAPDDLKAELMIVTRG
NT seq 1398 nt   +upstreamnt  +downstreamnt
atgaacgcggcacggggccccatcttctggcaccagggcatgttcctgcagccgcagcac
ttccagcttgccgagcgcggcgtgcactccctgctgaccccgtaccacaccctgctgacg
ccccatttctggggggtgtcccgggcggaggtaaggatagtctccaagggtctgtgctcc
atcgaattgaccgggggcgcctttctctttcccgacggcacctacatcgaattacccggt
aacgccatcgtccagtcccgtctgctcccccaggaagaggtttggacgtgcgctcccttc
accgtgtacctggggctcaggaaatggcaggaggaggcggaaaacgcaacctgcctgcag
caggacgactcccccgggatgtgcaacacgcggtacctcgtcgcttccgacccggtctcc
tgtccggacctccatgccggtggtcccaccgctgaggtccgccgcctggaccacgtcctg
aagctgttctgggagagcgagttggaccttctgggcgattacctgctgctccccctgacc
cggctggagacgcgcggcgacgggcttcacatctgtcccgacttcatccccccctgcctg
accattgccgctgttccgctgctggccgacctggtgcgggggatacgggaccttgtcgcg
gcccgcgcccgtcggctggaaagcaccaagaagcagcgcggtgtaacagacgccgacttc
ggatcgaaagacctggtctacctcttcgcgctcaggacggtgaaccgttacctcgcacag
ttggatcacctcatccaggcccgcgctatacatccctggcagctttacggcgtgctcgcc
cagcttgttgcagaactctcctgtctttccgggtccgtcacctccctggagacttcggtg
cctgacgacccgggcatcctggccggctacaaccacctcgacctgggcggctgcttcgcg
caggcccacgatgcgatcctgaagctcctggaccagctctgcgccgggccggaatacgcg
gtcagtctcagcttcgacggcaattattactgggcggacctcacccccgcccacttccag
ggaagaaaccgcttctacctggcgatcaccacggaagcggatcccgcctccgttctcgaa
tccctcgccagcgtggcgaagctcgcggcccgcgagaggctccctctcctgatggcccag
gcccttccgggagtccccctggagcaccagcccaaccctccccaggaacttccacgccgc
gcctcttcactgtacttcgcgatcgacagccgctccgaccattgggaacaagtgcgaaag
tggaacaacgtggctctcttctgggatcaggcacctgacgacctgaaggccgagctgatg
atcgtcaccaggggctga

DBGET integrated database retrieval system