Geomonas subterranea: KP001_18875
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Entry
KP001_18875 CDS
T07936
Symbol
alaS
Name
(GenBank) alanine--tRNA ligase
KO
K01872
alanyl-tRNA synthetase [EC:
6.1.1.7
]
Organism
gsub
Geomonas subterranea
Pathway
gsub00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
gsub00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
KP001_18875 (alaS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
gsub01007
]
KP001_18875 (alaS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gsub03016
]
KP001_18875 (alaS)
Enzymes [BR:
gsub01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.7 alanine---tRNA ligase
KP001_18875 (alaS)
Amino acid related enzymes [BR:
gsub01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
KP001_18875 (alaS)
Transfer RNA biogenesis [BR:
gsub03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
KP001_18875 (alaS)
Prokaryotic type
KP001_18875 (alaS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2c
DHHA1
tRNA_SAD
Motif
Other DBs
NCBI-ProteinID:
QXE90445
LinkDB
All DBs
Position
complement(4309948..4312575)
Genome browser
AA seq
875 aa
AA seq
DB search
MTGKEIRAQFFNFFQKKGHTLVESSNLIPKNDPTLLFTNAGMNQFKDVFLGLEKRDYIRA
VSSQKCVRAGGKHNDLENVGRTARHHTFFEMLGNFSFGDYFKKEAIAYAWELLTVDLGLS
KDRLYVTVYNDDDEAADIWHHQEGVPRERIYRFGEKDNFWSMGDTGPCGPCSEIFWDNGP
GTGCGSPDCAVGCDCDRYMEIWNNVFMQFNRDKDGTLTPLPKPSVDTGMGLERISAVMQG
VTSNYDTDLLQGIIRHIEGICGKKYRADEKDDVSMRVIADHSRATTFLICDGVLPSNEGR
GYVLRRIMRRAARHAKMLGVSEPMLYRVVDAVNMMMGDAYPELLEREHYVKKVIKAEEER
FIETLDRGLAILNEETAALKAKGETVLSGEVIFKLYDTFGFPVDLTADIVEAEALTLDED
GFALCMEKQRVKARENWKGSGEQGLAAIYKELHGSGITSEFVGYAEQTAYSTVSAIVKGG
VLVEEANAGDEVEIVTAKTPFYGESGGQAGDTGTISTGAAHVAVESTTRPFTDLIVHRGK
VVSGNIRNGEAVDLKVASANRTATARNHTATHLLQAALREVLGDHVKQAGSLVTPDRLRF
DFTHFSPMTAEEIRRVEILVNGHIMANDAVDAREMPAAEAMAAGATALFGEKYGDIVRVV
RVGEVSSELCGGTHVHGAGEIGFFKIISEAGIAAGVRRIEAQTGHGALAVVHQMEDEQRG
IATLLKAEGASPLDRVEKLLAGQRELQRELETLQAKLNASKSADLIQQVREQNGIKILAV
KVDGDAKGLRELSDTLKERIGSGIIVLGAGDAAKANLLVAVTSDLTSRWKAGDIIKAIAP
IVGGNGGGKPELAQAGGTKPENLAEALEAVYRIVG
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgacaggcaaagagatccgggcgcagttcttcaacttctttcagaaaaagggtcacacc
ctggtggagagctcgaacctcatcccgaagaacgaccccaccctcctgttcaccaacgca
ggcatgaaccagttcaaggacgtgttcctgggccttgaaaagcgcgactacatcagggcg
gtcagctcgcagaaatgcgtccgcgccggcggcaagcacaacgacctggaaaacgtcggc
cgcaccgcgcgccaccacaccttcttcgaaatgctcggcaacttctccttcggcgactac
ttcaagaaggaagcgatcgcctacgcgtgggaactgctcaccgtcgatctcggcctctcc
aaggaccgcctctacgtcacggtctacaacgacgacgacgaggccgccgacatctggcac
caccaggaaggagtgccccgcgagcgcatctaccgcttcggcgagaaagacaacttctgg
tccatgggagacaccggcccctgcggcccctgctccgagatcttctgggacaacggcccc
ggcaccggctgcggctccccggactgcgccgtggggtgcgactgcgaccgctacatggag
atctggaacaacgtcttcatgcagttcaaccgtgacaaggacggcaccctgacgccgctc
ccgaaaccctccgtcgacaccggcatggggctcgagcgcatctccgccgtcatgcagggg
gtaacctccaactacgacacggacctcttgcaggggatcatccgccacatcgaggggatc
tgcggcaagaaataccgggccgacgagaaggacgacgtctccatgcgcgtcatcgcggac
cactcccgcgccaccaccttcctgatctgcgacggcgtgctcccctccaacgaggggcgc
ggctacgtgctgcgccgcatcatgcgccgcgccgcgcgtcacgcgaagatgctgggcgtg
tccgagccgatgctgtaccgcgtggtcgatgccgtcaacatgatgatgggcgacgcctac
ccggaactcctcgagcgcgaacactacgtgaagaaggtgatcaaggcggaggaggagcgt
ttcatcgagaccctcgaccgcggcctcgccatcctcaacgaggagaccgcggcgctcaag
gccaaaggcgagacggtgctttccggcgaagtgatcttcaagctttacgacaccttcggc
ttcccggtcgacttgaccgcagacatcgtcgaggcggaggcgctcaccctcgacgaggac
ggcttcgccctctgcatggagaagcagcgcgtcaaggcgagggagaactggaagggctcc
ggcgagcaggggctcgccgccatctacaaggagctgcacggctccggcatcacgagcgag
ttcgtgggctatgccgagcagaccgcatactccaccgtgagcgccatcgtgaagggaggc
gtcctggtcgaggaggccaacgccggggacgaggtcgaaatcgtcaccgccaagaccccc
ttctacggcgagtccggcggccaggcgggcgacaccggcaccatctccaccggggcggcg
cacgtcgcggtggaaagtaccacccgccccttcaccgatctcatcgtgcaccgcggcaag
gtggtgtccggcaacatccgcaacggagaggccgtcgatctgaaggtcgcctcggcgaac
cgcaccgccaccgcgagaaaccataccgcgacccacctcctgcaggcggcgctgcgcgaa
gtgctgggcgatcacgtcaagcaggccggctccctggtcaccccggaccgcctgcgcttc
gacttcacccacttcagcccgatgaccgcggaggagatccgccgggtggagatcctggtt
aacggtcacatcatggccaacgatgccgtcgacgcccgcgagatgccggccgccgaggcc
atggccgcgggcgccaccgcgctcttcggcgagaagtacggcgacatcgtgcgcgtggtc
cgcgtgggcgaggtctcctccgagctgtgcggcggcacccacgtgcatggcgcaggcgag
atcggcttcttcaagatcatctcggaggcgggcatcgccgccggcgtgaggaggatcgag
gcgcagaccgggcatggcgcactggccgtggtgcaccagatggaagacgagcagcgcggg
atcgcgacactgctgaaggccgaaggcgccagccccctcgaccgcgtggagaagctcctg
gccggccagcgcgaactgcagagggagctcgagacgctgcaggcgaaactgaacgcctcc
aagtccgccgacctgatccagcaggtgcgcgagcaaaacggcatcaagatcctcgccgtc
aaggtcgacggcgacgccaaggggctgcgtgagctctccgacacgctcaaggagcggatc
ggctccggcatcatcgtgctcggcgccggcgatgccgccaaggcgaacctgctggtcgcg
gtcacctccgatctcacctcgcgctggaaggcgggggacatcatcaaggccatcgcgccg
atcgtcggcggcaacggcggcggcaagccggagctggcccaggccggcggcaccaagccg
gagaacctcgccgaggcgctggaggccgtgtaccgcatcgtagggtag
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