Gardnerella swidsinskii: K9E37_02575
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Entry
K9E37_02575 CDS
T08402
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
gsw
Gardnerella swidsinskii
Pathway
gsw00470
D-Amino acid metabolism
gsw00550
Peptidoglycan biosynthesis
gsw01100
Metabolic pathways
gsw01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
gsw00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
K9E37_02575
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
K9E37_02575
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
K9E37_02575
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gsw01011
]
K9E37_02575
Enzymes [BR:
gsw01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
K9E37_02575
Peptidoglycan biosynthesis and degradation proteins [BR:
gsw01011
]
Precursor biosynthesis
Amino acid ligase
K9E37_02575
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Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
UQA89042
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Position
complement(680442..681584)
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AA seq
380 aa
AA seq
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MTKKRVVFLYGGKADEHSISCISAAGVLSAVDENRFDIVRIAITKQGEWIVGGEDPRNFR
MEEGELPVITKTAGTRDVVLDPAKGADGFLARENDGTLTSLGHIDAVFPVLHGPNGEDGT
LQGLLEMMQVPYVGCGVLASAACMDKYYAKQLFKAAGINVAPGIALDARKFASDAENRFD
AYAEEILTQVEAAKLEYPLFVKPSRAGSSFGVTKVESRDAKALAEAIFEASEHDWRVLVE
QGIDAREIECAVLAARDGEEPKASWPGEVVLDKREAGEDQFYDFDSKYMDSAASHVEVPA
NLPAETLERVRKTALAAFKAADGRGLSRVDSFVTKDGRVILNEINTMPGFTPISMYPKAW
EATGISYNDLITKLIEGVLK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaaagcgtgtagtgttcttgtatggcggtaaggcagacgaacattcgatttct
tgcatatctgctgctggagtgctcagtgctgtagacgaaaatcgttttgacattgtgcgg
atcgcaatcacaaaacaaggcgaatggattgttggcggcgaagatccgcgaaacttccgt
atggaagaaggagagcttccggtaataacaaaaactgctggaacgcgcgatgttgtgcta
gaccctgccaaaggcgcagacggatttttagcccgcgaaaatgacggtacacttacaagt
ttgggtcatattgacgctgttttcccagttcttcacggtccgaacggtgaagatggcact
ttgcaaggcttgctagaaatgatgcaagttccatacgttggttgtggagtattggcttcg
gctgcgtgcatggataaatactatgcaaagcaactgtttaaagctgccggaattaatgtt
gctcctggaattgcacttgatgcgcgcaagtttgcaagcgacgcggaaaatcgctttgat
gcatacgcagaagaaattcttactcaagttgaagcagcaaaactcgagtatccgcttttt
gtaaagccaagccgcgcaggttccagttttggagttacaaaagttgaatcgcgcgatgct
aaagccttagcagaagctatttttgaggcttcagagcacgattggcgagtgttggtagag
cagggaattgatgcacgagaaattgagtgcgcggttcttgcagctcgcgacggcgaagaa
ccgaaagcaagctggcctggagaagttgtgctagacaagcgcgaggctggtgaagaccag
ttctacgattttgacagcaaatacatggattccgcagcttcgcacgttgaagttccagca
aacttgccagcggaaactttagagcgcgttcgcaaaacggcgcttgcagcgttcaaagcg
gcagatgggcggggactaagtcgcgtagattcttttgtaactaaagatggtcgcgtaatt
cttaacgaaatcaacacgatgcctggatttacgccaatctccatgtatccaaaagcttgg
gaagcaactggaataagctacaacgatttaatcacaaagcttattgaaggcgttttgaaa
taa
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