KEGG   Gloeophyllum trabeum: GLOTRDRAFT_31204
Entry
GLOTRDRAFT_31204  CDS       T03130                                 
Name
(RefSeq) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
gtr  Gloeophyllum trabeum
Pathway
gtr03030  DNA replication
gtr03410  Base excision repair
gtr03420  Nucleotide excision repair
gtr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:gtr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GLOTRDRAFT_31204
   03410 Base excision repair
    GLOTRDRAFT_31204
   03420 Nucleotide excision repair
    GLOTRDRAFT_31204
   03430 Mismatch repair
    GLOTRDRAFT_31204
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gtr03032]
    GLOTRDRAFT_31204
   03400 DNA repair and recombination proteins [BR:gtr03400]
    GLOTRDRAFT_31204
Enzymes [BR:gtr01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     GLOTRDRAFT_31204
    6.5.1.6  DNA ligase (ATP or NAD+)
     GLOTRDRAFT_31204
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     GLOTRDRAFT_31204
DNA replication proteins [BR:gtr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    GLOTRDRAFT_31204
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     GLOTRDRAFT_31204
DNA repair and recombination proteins [BR:gtr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     GLOTRDRAFT_31204
   NER (nucleotide excision repair)
    Other NER factors
     GLOTRDRAFT_31204
   MMR (mismatch excision repair)
    Other MMR factors
     GLOTRDRAFT_31204
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C 4HBT
Other DBs
NCBI-GeneID: 19305375
NCBI-ProteinID: XP_007860237
JGI: Glotr1_1_31204
UniProt: S7QMN1
LinkDB
Position
Unknown
AA seq 657 aa
MWRSAEKAISRTDEVDIEGGWKVGAPVPYAALAKTFALIEATTKRIEKTSLLTAFLLLVI
QRSAEGDTKSLLQCVYLCINRLSPDYVGIELGIGESLLVKAIVESTGRSLATVKAELKKE
GDLGLVAMNSKNSQKTLFKPKPLTVPFVFSNLKEIALSTGHSSQARKVSIITKLLAACQG
QEAKYIVRSLEGKLRIGNAERTVLVAVAHAAVLAEKEKAGKRWSNEKLASRLEEAAETIK
AVYSELPSYDEVIPALLEVGTERLRERCKLTPGVPLKPMLAKPTKAIGEVLDRFENKRFT
CEYKYDGERAQVHKKEDGTVSIFSRNSEDMSKKYPDLVEQLPRCIKDTTKSFVLDAEAVA
IDKDTKKLMPFQELSRRKRKDVKVEDIQVRVCLFAFDLLYLNGEPLLHKPLAERRELLRE
HFQPVDGEFQFAKASDGSTTDEIQAFLEESVKDGCEGLMVKMLESDASHYEPSRRSVNWL
KLKKDYLAGVGDSLDLVVVGGYYGKGKRTNVYGAFLLACYDADSEEYQTICKIGTGFSEE
MLQSHYETLKPLEMQKPRGDVKVGGAKPDVWFEPKIVWEVLTADLSLSPIYTAAQGLVEE
RGISLRFPRFIRVRGDKSADDATGPEQIAEMYERQALAQGNNGKKKRGGEDGDDGFW
NT seq 1974 nt   +upstreamnt  +downstreamnt
atgtggcgcagcgcggagaaggccatatcgcgtactgatgaagtcgacattgagggcggc
tggaaagtcggtgcaccagtcccatacgccgcacttgctaaaacattcgccttaatcgag
gccaccacaaaacgcatagagaagacgtccctgctaacggccttcttgctcctcgtcata
cagagaagcgccgagggagacacgaagtctctgctccagtgcgtgtacttgtgcattaac
cggctgagtccagactacgtcggcattgagctgggcataggcgagagccttcttgtcaag
gcaatcgttgaatcgacaggacgaagtctggcaacagtcaaggcagaactcaagaaagaa
ggtgacctgggactggtagcaatgaactcgaaaaacagccagaagacattattcaagccc
aaaccattgacagtgcctttcgtgttctccaatctgaaagaaattgccttgagtacaggc
cactcgtcacaagccaggaaggtgtccatcatcaccaagcttctcgccgcatgccaggga
caagaggcgaagtacattgtgcggagtttagagggtaagctgaggataggaaatgccgag
cgcaccgtcctcgtcgcggtagcccacgctgccgtattggctgagaaggagaaggcgggc
aagcgctggagcaacgaaaagctggcctctcgactggaggaggcagctgagaccatcaaa
gctgtctacagcgaattaccctcgtatgacgaggtcatccctgctttgctcgaagttggc
acggaaagattacgagagagatgcaagctgacaccgggcgtaccgttaaaacccatgctc
gccaagccgaccaaggctatcggcgaagttctcgataggttcgagaacaagcggttcacc
tgcgagtacaagtacgacggggaacgagctcaggtacacaagaaagaagacgggacagtg
tccatcttcagtcggaattctgaggacatgagcaagaagtatcccgatcttgtcgagcag
ttgccccgctgcatcaaagatactacgaagtcattcgttctggacgccgaggccgtagcc
atcgacaaggacacgaagaaactcatgcctttccaggagctgagtagaaggaaacgtaag
gatgttaaagtggaagacattcaagttcgcgtttgcttgttcgcctttgatctgttatac
ctcaatggagagccattgctgcacaagcctctagctgaaagaagggagctactgagagaa
cacttccagcccgtcgacggggaattccagttcgcgaaagcgtctgatggctcgaccaca
gacgaaatccaggctttcttggaagagagcgtgaaggacgggtgtgaagggctcatggta
aaaatgctggagagtgatgccagtcattatgagcccagtcgacgcagtgtcaactggcta
aaactcaagaaggattacctggcaggcgttggcgactcgctggaccttgtggtagtgggc
ggatattacggcaagggcaaacggaccaatgtctacggtgccttcctattggcctgctac
gacgcagattcggaggaatatcagaccatatgtaagatcgggacgggcttcagcgaagag
atgctgcagtcccactacgaaaccctgaagcctctggagatgcagaagccgaggggcgac
gttaaggtcggcggcgcgaagcctgacgtgtggttcgagcccaaaattgtctgggaagtc
ttgacagcagacctgagtctcagtcctatttataccgcagcgcaaggattagtggaggaa
cgcggaatatcgttgcgatttcctcggtttatacgagtgcgaggtgataagtctgccgat
gatgctaccggaccggagcagattgcggagatgtacgagcgacaagctctggcccaagga
aataacgggaagaagaaacgaggtggcgaggacggagacgacgggttttggtaa

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