Gloeophyllum trabeum: GLOTRDRAFT_59735
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Entry
GLOTRDRAFT_59735 CDS
T03130
Name
(RefSeq) hypothetical protein
KO
K06100
symplekin
Organism
gtr
Gloeophyllum trabeum
Pathway
gtr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
GLOTRDRAFT_59735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gtr03021
]
GLOTRDRAFT_59735
03019 Messenger RNA biogenesis [BR:
gtr03019
]
GLOTRDRAFT_59735
Transcription machinery [BR:
gtr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
GLOTRDRAFT_59735
Messenger RNA biogenesis [BR:
gtr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
GLOTRDRAFT_59735
U7-dependent histone pre-mRNA processing factors
GLOTRDRAFT_59735
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
Motif
Other DBs
NCBI-GeneID:
19307314
NCBI-ProteinID:
XP_007865191
JGI:
Glotr1_1_59735
UniProt:
S7QAP5
LinkDB
All DBs
Position
Unknown
AA seq
1165 aa
AA seq
DB search
MAGNPVDPLQTLSAALAVPPDSKEQAELLATLRESLEAYPGPIPILCKTLIRTLSGAGDS
VLKRWVLDLLHFAICRSNLSVEVRTDLASQSVETLAGLLNDPNPNSVKLVVQCFATVYPL
LFRVLCTNRNLRQMWDVLSQAKARILDFVRAAGVPMGIKLASVKFMQRVILVQTRGVADP
RLQNKNDPNLAMCPSDHPFIPVAALEAEGVKLLEGIITMLYTSSNPDILSAILNSWANLV
KNRPGPLVQIVVTALTQWTPNALAGQPASSIKSVEKAVRILLIHISRTPQGAPYVGQINE
ALAVQGARMDRAAAEEKARKAAAAEASRKRPASVPQESPPDSKRVKLEPDQNAAAAAAFL
ASFDFTTLPTTLINDLIIANLYAFPEPALQALVLTYRDTRRPSAPAAAPAPVAAPVASAP
VVPPNAPPPSASVAGPPTAPAAAVAPTEKKAATPVPSAPPPVKEEPVDPLQMDIDEEEME
YEPDKLNLELSAGEHADAEDGDMGVPEAIDIDLLTELKLPPPKVWSEEDRDALIGSSMSR
IREGVDVVSPGDDTTVNPSKMVATDLWMLLIIRMVTRVVECPKPGKDTEAGAGEDSKDDV
ELFARQERLRQRLCDYIMANFSARVRLATTWMNEEWYNDRIRSADDPDWRPNYDIWLSQI
LAAYQTHMDARDRTFTRFLLDLPSIPPDVLEMLRELCLDSERMTVGFTTLREFVLQRPTL
RYEAINVLLELTTHSEKLIRGAAINTVKRWVPDVQPMGDMVRAFALHILRRLQSRAPKEK
QADEDIAMNGEGENMEDGQLPAEDLVQTPYLPEELDSPVQRAQVLQHVELLFALSVKSPD
LLDEIFTAYGQMERPVQETVQELITPLIRSLGSSHGKLLTLLRTFPSGAESLALRVLTIF
TEHGRPSPQLVALVKGLITERDLNAKFLIPIIAEMDKADIVRHLPRIVSILNGNTEEKNL
VRSVFSAIVTTPPETFGTVTSNLPRVRQSELLTPAELMVLLHSAEKEIGLKAAIEAIGIC
FSMTDVFRSEILAVVMQQIVDQPVLPTLFLRTVIQAVTTYKSLVGFVSTTLLSRLITKKI
WTNPPLWEGFIRCAKIIAPSSFGALLQLPKDQLRDLVEKQPSLKAGLRDYVMKKAGNKAQ
KAGYLDFLGDDTSSQQPQAVAPSPA
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaaaccccgtagatcccttgcagacgctttctgcagcgttagccgtcccgcct
gactcgaaggaacaggctgagctgcttgcgacgttacgtgaatcccttgaggcttacccc
ggtcccatacctattctctgtaaaacgctcattcggacgctgtccggcgcaggggactcg
gtcctcaagcgatgggtactggacttgttacatttcgcgatatgtcggtcaaacctatct
gtggaagtccgcacagacttggcttcgcagtccgtcgagacattggctggcctgttgaat
gatcccaacccaaattccgtcaagttggtcgtgcaatgcttcgcgacggtgtatcccctg
ctcttccgcgtcctatgtacaaatcgtaacctccggcaaatgtgggacgtcctttcgcag
gcaaaggcgaggatccttgactttgtgcgcgctgctggggtgcccatggggataaagctg
gcgtcggtgaagttcatgcaacgcgtgatcctcgttcagaccagaggcgtagctgatcct
aggcttcagaacaagaacgaccccaatctagccatgtgtcccagcgaccatcccttcata
cccgtggctgcgcttgaagcggaaggcgtcaagttgctcgagggtataatcacgatgctt
tataccagctccaatccggatatcctatccgctatattgaacagttgggctaacctggtc
aaaaacagacctggcccccttgtccaaatagtggttacggctcttacgcaatggactccc
aatgctctagcgggacaaccagcttcatctatcaaaagcgtcgaaaaggctgtccggata
ttattgatccacatctcacgaacaccacaaggcgcgccgtatgttgggcagatcaatgaa
gcgctcgccgttcagggagcacgtatggaccgagctgccgcggaagaaaaggctcgcaag
gctgctgccgctgaagccagcaggaaaaggccggccagcgtaccgcaggagtctccacct
gattccaagcgagtgaagttggaaccagaccagaatgccgcggcggcggcggcattcctg
gcatcgttcgacttcaccaccctacccaccacccttattaacgacctcattatcgctaac
ctatatgcattccccgaacctgcgttacaggccttggtgctcacgtatcgagataccaga
cgaccatccgctcctgctgcagcacctgcaccagtcgcagcgccggtggccagtgcgccg
gtcgttccccccaatgcaccccctccgtcagcatcagtagcaggacccccaacagcccct
gcggctgcggttgcccctactgagaagaaggcagccactcccgtgccgtccgcacctccg
cctgtcaaggaagagccagtcgatcctttgcagatggatatcgacgaagaagagatggag
tacgaacctgacaagctcaacttagagctctctgccggcgagcacgcagacgcagaagat
ggcgacatgggagttcctgaagctatcgacattgacctcttgacggaactcaaattgccc
ccgccaaaagtatggtcggaggaagaccgagacgcactaataggatcatctatgtcgcgc
attcgagaaggggtggacgttgtgagtcctggtgacgatacgaccgtcaacccgtcaaag
atggtcgcgacagacctgtggatgctgttgattatccggatggtaacgagggtggtcgag
tgtcccaaaccgggtaaggacacggaggcaggagcgggggaggactcaaaagatgacgtc
gagctcttcgcgcgacaagaacgattaagacaacggttgtgcgactatatcatggcaaat
ttttccgctcgagtccgacttgccacgacatggatgaacgaggaatggtacaacgatcga
atacggtcggcagatgacccggattggagacctaactacgacatatggctcagccagatt
cttgccgcataccagactcacatggatgctagagatcggacgttcacgcgatttttgcta
gacttgccttcaatacctccggatgttttggagatgttgcgggaactctgtttagattcc
gaacgcatgactgttggctttaccactcttcgcgaatttgtgctgcaacggcccacgttg
cgatacgaagccataaacgtgttactggagctaacgacacattctgaaaaacttatccgt
ggcgccgccatcaacacggtcaagcgatgggtcccggatgtacaaccgatgggtgatatg
gttcgcgcattcgctcttcatatcctacgaagactgcagtctcgcgcgccgaaagaaaaa
caggcagatgaagatatagccatgaatggggagggggaaaacatggaggatggccagtta
cctgcggaagacttggtccaaactccttatttgccggaggagctggattctcctgtgcag
cgagcgcaggtcctacagcacgtagagctattatttgctctctcggtcaagagtcctgat
ttgttggacgagatattcactgcatacggccaaatggagcggcccgtccaggagactgtc
caggagctcatcactccccttatccggtcactaggctcaagtcacgggaaacttctgacc
ctcttgcggacattcccctccggcgccgagtctctggctttacgggtgctcaccatcttt
actgaacatggtcggccaagtccacagctcgtcgctctagtgaagggtctcatcactgaa
cgagacctgaatgcgaagttcttgatccctattatcgccgagatggacaaggcggatatc
gtgcgacatttaccccgtattgtgtccattctcaatggcaacacggaggaaaagaatctc
gtgcggtcggtgttcagcgctattgttacgaccccgccggagacgtttggcacggttacc
tcaaatttgcctcgagtgcggcagagtgagctactcacccctgcggaacttatggtactg
ttgcattcggctgagaaggagatcggcctgaaggctgcaattgaagccatcggaatctgt
ttctccatgactgatgttttccggtccgagattcttgccgtggttatgcagcagatcgtg
gatcaacccgtgctgcccacgttgttcctccgaacggtcatacaggccgtgaccacctac
aagtcgcttgtcgggttcgtgtcgacgacgctactgtcgcggcttatcaccaagaagatt
tggacaaatccgccactctgggaaggcttcattaggtgtgcgaagatcatagcgccctcg
agtttcggggcgttgcttcagctccccaaagaccaactccgggaccttgtggaaaaacag
cccagtctgaaagcaggtctgcgcgactatgttatgaagaaggctggaaacaaggcgcag
aaggctgggtacctcgatttcctaggagacgatacctcttcgcagcaaccgcaagcagtg
gcgccgtctcctgcatag
DBGET
integrated database retrieval system
