Gloeophyllum trabeum: GLOTRDRAFT_74145
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Entry
GLOTRDRAFT_74145 CDS
T03130
Name
(RefSeq) histone deacetylase complex protein
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
gtr
Gloeophyllum trabeum
Brite
KEGG Orthology (KO) [BR:
gtr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gtr01009
]
GLOTRDRAFT_74145
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gtr03019
]
GLOTRDRAFT_74145
04131 Membrane trafficking [BR:
gtr04131
]
GLOTRDRAFT_74145
03036 Chromosome and associated proteins [BR:
gtr03036
]
GLOTRDRAFT_74145
Enzymes [BR:
gtr01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
GLOTRDRAFT_74145
Protein phosphatases and associated proteins [BR:
gtr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
GLOTRDRAFT_74145
Messenger RNA biogenesis [BR:
gtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
GLOTRDRAFT_74145
Membrane trafficking [BR:
gtr04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
GLOTRDRAFT_74145
Chromosome and associated proteins [BR:
gtr03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
GLOTRDRAFT_74145
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Arb2
PH_5
Radical_SAM_2
Motif
Other DBs
NCBI-GeneID:
19308407
NCBI-ProteinID:
XP_007864501
JGI:
Glotr1_1_74145
UniProt:
S7RVT7
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
MDVDTIQAAGRSSVGEERRAVSVPLEPSRQPQYTVGYVYDPVMMSHWRPGLDHPEQPERI
SRIYQIIKDNKLLNKMKRIPIRRVRHEEVLLVHSAVHLAKVLEISSFTEEYILESDAFYN
ELSLYVSPKTPLAAELSAGGVIEATLAVARNELKKTFAIVRPPGHHAEPEEHMGFCFFNN
VAIAVRTVQQMTNIRKILILDWDVHHGNGTQKAFYDDPSVLYMSLHRYEGGRFYPCGPFG
SMEMSGEGDGVGYSVNIPWPEKGMRDADYLHAFYHVVMPIAREFAPELVIISAGFDAADG
DELGECHVSPAGYAHMTHMLSSLAGGRLVVALEGGYNLDAISNSALAVARMIVGEEPPEL
APMVASETGTETVYQVAKEQSKYWKSVVPKAVEPREELEPLTFSIPELLKAHRQDYMYRH
HNMLQIPLLTQNTEERFGTQIMCTPDINDNKTMVIFLHEFGNIQVEFDSIVKGTLHEEHS
YLVDCSRQVVDWVREEGYSLLDVNIHAKPVEGTEKKRGAQAPAEQELITYLWDNYVLLSK
AKCLILIGHGSACQTLMLLMNTRPNSMMRRTLAILQIVGNGRVPLTPKDSKEAVELKAWY
AKHSLVIIPKNHRLLSEKPLKRHGRLWVIEETKPVKLMMKALPAIQKYVRQAMAALPRDD
ALVNGDS
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggacacaattcaggctgctgggcgctcttccgtcggggaagagcgtcgagca
gtctctgtcccacttgagccatcacggcagccacagtataccgtcggttacgtctacgac
cccgtcatgatgtcccattggcgccctgggcttgaccacccggagcaaccagaacgtatt
tccagaatttatcaaattatcaaggataataaactcctcaataaaatgaagaggatcccg
atcagacgcgtgagacacgaagaagtccttctcgtgcacagcgctgtccacctggccaaa
gtgctcgagatcagctcttttaccgaggagtatattctagagtcagatgctttctacaac
gagctgtccctctatgtttctcctaagacacccctggccgcggagctaagtgccgggggt
gtcatcgaagcaactcttgccgtagcaaggaacgaattgaagaagacatttgccatcgtc
cgtcctccaggacaccacgccgagccggaggaacacatgggcttctgctttttcaacaat
gtggcaatcgcagtacggacagttcaacagatgacgaacataagaaagattctcatattg
gactgggacgtgcaccatggcaatgggactcaaaaggccttttacgacgacccgtccgtg
ctgtacatgtctctgcaccgctacgagggtggccgtttctatccatgcggccctttcgga
agtatggaaatgagcggcgagggggatggtgtgggatactcggtgaatattccatggcca
gaaaagggcatgagggacgccgattacctacatgccttttaccatgtagtcatgccaatc
gcaagagagttcgcccccgagctagtaatcatctccgctggcttcgatgcagccgacgga
gacgaacttggcgaatgtcacgtctcaccggctggatatgcacatatgacgcacatgctt
tcgtccttagcgggcggacgactggtcgttgctcttgagggagggtataaccttgacgcc
atatcgaattctgcgttggcagtcgcacggatgatcgttggcgaagagccaccagaactt
gccccgatggtcgcttcagagaccggcacggagaccgtgtatcaggttgctaaagagcag
agtaagtactggaagagcgtcgtgcccaaagcagtggaacctcgcgaagaactggaacct
ctcaccttctcgatacctgaattgttaaaggcgcatcggcaggattatatgtaccgccac
cacaacatgctccagatacccctattgacccagaacacggaggagcggtttggaactcaa
attatgtgcacgcccgacatcaatgacaacaagacgatggtaatatttctgcatgaattc
gggaatattcaggtagagttcgacagtattgtcaagggcacattgcatgaggagcactca
tacttggttgattgctctagacaagtggttgactgggtccgcgaagaggggtactctctg
ctcgacgtcaacattcatgcaaagcctgtagagggcactgagaagaaacgaggagctcag
gctccagcggagcaggagctcatcacatacctttgggataactacgttctgctgtctaag
gccaagtgcctcattctcatagggcatggctcggcctgccagacgcttatgcttctgatg
aataccaggccgaatagtatgatgcgacggacgctagcgatcttgcaaattgttgggaat
ggtcgggtccctctgacaccgaaggactcgaaggaagcagtcgagttgaaagcttggtat
gccaagcactccctcgtcatcattcccaaaaaccaccgattgctatctgagaagcccctc
aagaggcatggaagactttgggtgatagaggaaacaaagccagtcaaacttatgatgaag
gcattaccagctatacaaaaatacgtcagacaagccatggctgctctcccgcgcgatgat
gcccttgtcaatggcgatagctga
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integrated database retrieval system
