Geotalea uraniireducens: Gura_1100
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Entry
Gura_1100 CDS
T00521
Name
(GenBank) metal dependent phosphohydrolase
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
gur
Geotalea uraniireducens
Pathway
gur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Gura_1100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gur03019
]
Gura_1100
Messenger RNA biogenesis [BR:
gur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Gura_1100
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
HDOD
KH_1
KhpA-B_KH
KH_2
DUF883_C
DUF1490
Motif
Other DBs
NCBI-ProteinID:
ABQ25306
UniProt:
A5GAT3
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Position
1294667..1296232
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AA seq
521 aa
AA seq
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MKIDMMTMILAVIAAAIGFLIGNLLRKKSSDAIVASAEELAAKMVEESKRQAETITKEAS
LQAKDVVYQAKADFERETKDKRRDLQALEKRLQQKEENLDKKMNLFDQRDAEFLKREQGL
AAKEQVLGQKDEKLNQLISEERTRLENISGMTAAEAKKILMETMENEAKLDAAKRIKAIE
EEARETADKKSKEIMALAIQRYAGEYVAERTVSVVALPSDEMKGRIIGREGRNIRALEAA
TGIDLIIDDTPEAVILSGFNPVRREVAKLSLEKLIADGRIHPGRIEEVVAKAEEEVELAM
KEAGEQAAFDLGVHGIHPEILKLIGRLKYRTSYSQNVYQHSLEVAFLCGIMAAELGINVK
QAKRAGLLHDLGKAVDHEVEGSHAVIGAELAKKYGESPKIVHAIMAHHEDEKPATVLAIL
VQAADALSGARPGARREMMETYVKRLDDLERIACSFSGVTNSFAIQAGREIRVMVSSEEI
SDERTLILAKDIAKKIETEMTYPGQIKINVIRETRATEYAR
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
ttgaagatagatatgatgacaatgattttagcagtaatagcggctgccattggctttttg
atcggtaatctgctgcgaaagaaatcttccgacgccatagtggcttcggccgaggaacta
gcagcaaaaatggtggaagaatccaagcgtcaggcggaaaccattaccaaagaagcatcc
ttgcaggcaaaagatgttgtttatcaggccaaagctgattttgaaagggaaacaaaggat
aagcgtcgcgacctgcaagcattggaaaaacgtttacagcaaaaagaagaaaatctcgat
aagaaaatgaacctgttcgaccagcgcgatgcggagttccttaaaagggagcagggcttg
gccgcgaaagagcaggtgcttggacaaaaggacgaaaaactcaatcagctgattagcgag
gagcggacgagactggaaaacatttcaggaatgacggctgctgaagccaaaaaaatcctg
atggaaaccatggaaaatgaagcgaagctggatgctgcaaaacgcatcaaggcgatagag
gaagaggcaagggagactgccgacaagaaatccaaggaaataatggccttggctatccag
cgctatgccggtgagtatgttgccgaacggaccgtctcagtggttgctcttccctccgac
gagatgaaggggcgcatcatcggccgcgaagggcgtaacatcagggcattggaggccgca
accggcattgacctgattatcgacgatacgcctgaagcagttattctctcaggatttaac
cccgtccgccgtgaggtggcgaagctttccctggaaaaactgatagcggacggccgcatc
catcctggccgtatcgaggaggttgtggcgaaggctgaagaagaggtggaattggcgatg
aaggaggcaggcgaacaggctgcctttgacctgggggtccacggtattcatccggaaatt
ctcaagctgatcggccgactcaaatataggacctcttatagtcagaatgtttaccagcat
tctctagaggtggctttcctgtgcggcattatggccgccgaactgggaatcaatgttaag
caggcaaaaagggcgggcttgcttcacgacctcggcaaagccgttgatcacgaagtggaa
gggtcgcatgctgttattggcgcagaactggcgaaaaagtacggtgaatcgcccaaaatc
gttcatgctatcatggctcaccatgaagacgaaaaacctgcgacagtcctggcgatactg
gttcaggctgccgatgccctttccggcgctcgtcccggcgctcgccgcgaaatgatggaa
acgtatgtcaagcgtctggatgacctggagcgcatcgcctgttccttcagcggcgtgacc
aattcctttgccatccaagccggtcgtgaaatccgggtcatggtttccagtgaggagatc
agcgatgagcggacgctcatcctggccaaggatatcgccaagaagatcgagacggaaatg
acctatcccggtcagatcaagatcaatgtgatcagagagacacgggctaccgaatatgcc
cgttaa
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