Gardnerella vaginalis 409-05: HMPREF0424_0018
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Entry
HMPREF0424_0018 CDS
T01146
Symbol
ppc
Name
(GenBank) phosphoenolpyruvate carboxykinase (GTP)
KO
K01595
phosphoenolpyruvate carboxylase [EC:
4.1.1.31
]
Organism
gva
Gardnerella vaginalis 409-05
Pathway
gva00620
Pyruvate metabolism
gva00680
Methane metabolism
gva01100
Metabolic pathways
gva01120
Microbial metabolism in diverse environments
gva01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
gva00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
HMPREF0424_0018 (ppc)
09102 Energy metabolism
00680 Methane metabolism
HMPREF0424_0018 (ppc)
Enzymes [BR:
gva01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.31 phosphoenolpyruvate carboxylase
HMPREF0424_0018 (ppc)
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Gene cluster
GFIT
Motif
Pfam:
PEPcase
PEPcase_2
Motif
Other DBs
NCBI-ProteinID:
ADB14120
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All DBs
Position
complement(19084..21840)
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AA seq
918 aa
AA seq
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MATENQQVTPADATIVTSGLGRKGPEERDLPASLKQDMDLCLHILRDVLGEFDEKLLAVF
DDVRLNAVEASAAHFAQMVDAKVTADDGLSKAVSKLNGMNLHDTQLLARAFATYFHLANL
CEENYRVSVLHQRECEVEDSLPVDPVNELTCAYHKLLTEMSPAEAKELLAKLEFHPVFTA
HPTEARRKAVAGKIRRISQLLSEHHRLGGSDKRENYRRLYNEIDALLRTSPIALKKPTPV
EESDTILDIFDATLFDTIPVVYRRFDDWLLGKKAGLVPPRCPAFFHPGSWIGSDRDGNPN
VTAKVSRQVARKFSDHVLAALENRTREVGKCLTMETRTTPPSVELLELWNRQREMSEQLT
ENASDVSNSEPHRAVMLVMADRLHRTISRDTDLMYHSCEDFIEDLQIVQRSLAEGGDPRA
AYGPLQDLIWQAQTFGFHMVEMEFRQHSLVHSRALEDIREHGLHGERGPLQPMTREVLDT
FRALGAIQKRNGMRAARRYIISFAKSAQHVRDVFELNRLAFAHPQDAPTIDVIPLFEQLE
DLQNSVNVLEEIIKIPEVQARLKATGRKMEVMLGYSDSSKDAGPTSATLALHSAQERIAK
WAKKHDIDLTLFHGRGGAVGRGGGPANRAVLAQPVGSVNCRFKLTEQGEVIFARYGNPIL
AIRHVESVASATLLQSSPSVEKTNTDMTKKYADMAAKLDVAAHERFLDLLQTDDFTPWFS
TVTPLSEIGLLPIGSRPAKRGLGAKSLDDLRTIPWVFSWAQARINLAAWYGLGTACEKFG
DLETLRRAYEEWPLFSTFIDNIEMSLAKTDERIARMYLSLGDREDLSDKVLSEMQLTRKW
VLQIVDDKWPLQHRHVLGQAIRVRSPYVDALSVIQSLALHKLRNKVDKEELSESQQAEFI
YLILCTVSGVAAGLQNTG
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atggcaacagaaaatcagcaggttactccggcagacgcaactattgttacgtctggctta
gggcgaaaaggcccagaggagcgtgaccttccagcatcacttaagcaagacatggatttg
tgcttgcatattcttcgcgatgttcttggcgaattcgatgaaaaattattagcagtattc
gacgatgtgcgtttgaatgctgtagaagctagtgcggctcattttgcgcaaatggtagac
gcaaaagtaactgcagatgatggcttaagtaaagctgttagcaagctcaacggaatgaat
ttgcacgatacgcagcttttagctcgtgctttcgcaacatatttccacttggcaaatttg
tgcgaggaaaattatcgtgtttctgtacttcatcagcgtgaatgtgaagttgaagattca
ttgcctgttgatccagttaacgaactaacttgtgcttatcacaagttgctcactgaaatg
agccctgctgaagcgaaagaattgcttgcaaagcttgagtttcatcctgtatttaccgcg
cacccaaccgaagctcgtcgtaaagccgttgcaggtaagattcgcagaatttcgcaatta
ctaagcgaacatcatcgtttaggcggatctgataagcgcgaaaattatcgacgtctctat
aacgaaattgatgcgcttcttcgcacttctccgattgctttgaagaagccaactccagtt
gaagaatctgacaccattctcgacatttttgacgccactttgtttgacacgattccagtc
gtgtatcgtcgatttgacgattggctgcttggtaagaaggctggattagttcctccgcgt
tgccctgcattcttccatccaggaagctggattggttcagatcgagatggcaatcctaat
gtgacagctaaagtgagccgtcaagtcgctcgaaagtttagcgatcacgtgcttgcagct
ttggagaatcgcacgcgcgaagttggcaagtgcttaactatggaaactcgcacaactcct
ccaagcgtggagttgcttgagttatggaatcgtcagcgcgaaatgagcgaacagcttaca
gaaaacgcttcagacgtttctaatagtgagccacatcgtgcagtaatgttggtaatggct
gaccgtttgcatcgcactattagccgcgatacggatttgatgtatcattcttgcgaagat
ttcattgaggatttgcaaattgtgcaacgctctttggcagaaggcggagatcctcgtgct
gcatatggtcctttgcaggatttgatttggcaagcgcaaacctttggattccacatggtt
gaaatggaattccgtcagcattctctcgtgcattctcgcgctttggaagatattcgcgaa
catggattgcatggcgaacgcggtccgcttcagccaatgactcgtgaagtactcgatacg
ttccgcgctttaggagcaattcaaaagcgcaacggtatgcgcgctgctcgacgttatatt
atttccttcgcaaaatctgctcagcatgtacgtgacgtatttgagctaaatcgtcttgct
ttcgctcacccacaggatgcgccaacaatcgacgtcattccgctgtttgagcagttggaa
gatttgcaaaactctgtaaatgtgcttgaggagattattaaaattcctgaagtgcaagct
cgtcttaaggctactggccgcaagatggaagttatgcttggctactcggattcttccaag
gatgctggtcctacttccgcaacgcttgctttgcattctgctcaggagcgcattgctaag
tgggctaagaagcacgatattgatttgacactgttccacggccgcggcggtgctgttggt
cgcggtggcggtcctgcaaaccgtgcagtgcttgctcagccagttggttccgtcaactgc
cgcttcaagcttactgagcagggcgaggttattttcgcacgatatggcaatccaattctt
gctattcgtcacgttgaatccgttgcttctgcaactttgcttcagtcttcgccaagtgtt
gagaaaactaacactgatatgacgaagaagtatgcggatatggctgcaaaacttgatgtt
gcagctcatgagcgtttccttgatttgctgcaaacggatgactttactccatggttctct
acggttacgccgcttagtgagattggtttgcttccaatcggttctcgcccagctaagcgc
ggtttgggtgcgaagtcgttggatgatttgcgcacaatcccgtgggtgttctcctgggct
caggctcgcattaacttagcagcatggtacggattgggtactgcttgcgaaaagtttggc
gatttggaaactttgcgtcgcgcttacgaagagtggccgctgtttagtacttttattgac
aatattgagatgtctttggctaaaacggatgagcgtattgctcgcatgtacttaagcctt
ggagatcgcgaagatttgagtgataaagtactttcagaaatgcagcttactcgcaagtgg
gttttgcaaattgttgacgacaagtggcctttgcaacatcgtcacgtgctcggtcaggca
atccgcgtgcgctcgccttatgttgacgcgctgtctgtaatccagtcgcttgcattgcac
aagcttcgcaacaaggtagacaaagaagagcttagcgaaagccaacaggcagagttcatc
taccttattctttgcactgtttctggtgttgctgcaggcttgcagaatactggatga
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