Gardnerella vaginalis 409-05: HMPREF0424_0439
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Entry
HMPREF0424_0439 CDS
T01146
Name
(GenBank) ABC transporter, ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
gva
Gardnerella vaginalis 409-05
Pathway
gva02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gva00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HMPREF0424_0439
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gva02000
]
HMPREF0424_0439
Transporters [BR:
gva02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
HMPREF0424_0439
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA_22
oligo_HPY
AAA_16
AAA_29
Zeta_toxin
RsgA_GTPase
TniB
SLFN-g3_helicase
AAA
AAA_5
AAA_13
Sigma54_activat
nSTAND3
AAA_25
TsaE
APS_kinase
AAA_24
Sigma54_activ_2
CbiA
NB-ARC
RuvB_N
PTPS
Motif
Other DBs
NCBI-ProteinID:
ADB13946
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Position
481368..483029
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AA seq
553 aa
AA seq
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MTNLDAQALNNKDLDARKRIVISVEDLSVSIDGRQITRNVSMRLRAGIVSALVGESGSGK
SLTALALMGLLDNNARVEGNAALLNASDTNESFINLLSEDASYEHIRGGMIGMIFQEPSS
AFNPVKTIGKQIEEALIYHPEKAGKLSQRDRKKRVISQLLEVELSDAERVYRSYPHELSG
GQLQRAMIAMALINRPQVLIADEPTTALDITTQRDILRLIRNLSEKLQLAVLIITHDMSV
VRALADEMYVMQGGNIVEFGEVQHIFANPKHEYTRTLLDSVPKFDMQYASSGDSYESIEE
VAKAIAKNIAKNISESPGSESPVVEVQGVSVKYSHARFSKNSNKLALANANLRINSGSTL
ALVGESGAGKTTIAKLISGQIKPNSGLVLLNGENLNRLNNKARRQALSRIGYVFQDSGSA
LNPRKTIGWSIAEPLLLHTNLDANERLERVEEMLNQVQLPVEFASRFPHELSGGQRQRVG
IARALILQPSLLIVDEPTSALDVTVQRCVLNLLHDLQQKYRYACLFITHDVGVVQEVASE
VAIIRNGSVQYIS
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatttggatgcgcaagctttgaataataaagatttggatgcgcgtaaaagaatt
gttataagcgttgaagatttgtcggtttcgattgacggtaggcaaattacacgcaatgtt
tctatgcgattgcgtgctggaatagtttctgcgttagtaggcgagtccggttctggaaag
tcacttactgcgctggctcttatgggattgctcgataataatgcgcgtgttgaagggaat
gcggcgcttcttaacgcttcggatactaacgaatcttttataaatttgcttagcgaagat
gcctcttatgagcatattcgcggtggcatgattggcatgatttttcaggagccgtccagt
gcgtttaatcctgtgaaaacaattggcaagcaaatagaagaagcgctaatatatcatcct
gaaaaagcaggaaagcttagccaaagagatcgtaagaagcgtgtgatttcgcagcttctc
gaggttgagttgagtgatgctgagcgcgtgtatcgttcttatccgcatgagctttctggc
ggccaactccagcgtgcgatgattgctatggctttaataaatcgtccacaagttttgatt
gcagacgagcctacaacagcactcgacatcaccacgcaacgagatattttacgtcttata
cgtaatttgtcggagaaattacagcttgctgtattaattattacgcacgatatgagtgtt
gtgcgcgcgctcgcagatgaaatgtatgtaatgcaaggcgggaatattgtggaatttggc
gaagttcagcatatttttgcgaatcctaagcacgaatatacgcgcactttgctagattct
gttcctaaatttgatatgcaatatgcttcaagtggtgattcttatgaaagtatagaagaa
gtagcaaaagcaattgctaagaatattgctaagaatatttctgaatctccaggatctgaa
tctccagtagttgaagttcaaggcgtaagtgtgaagtattcgcatgctcgttttagcaaa
aattcaaataagcttgctctcgctaatgcaaacttgcgcattaactctggctctacacta
gctttagtcggggagtctggagctgggaaaaccactattgcaaagcttatttctgggcaa
atcaaaccaaattcaggattagtgctacttaatggagaaaacttaaacagattaaacaat
aaagctcgccgccaagcattatcgcgaattggatacgtttttcaagattcaggttccgca
ctaaatccgcgtaaaaccattggctggagtattgcagaaccattacttttacacacgaat
cttgatgccaatgagcgtttagagcgcgttgaagaaatgcttaatcaagtacaactgcca
gttgaattcgcaagccgttttcctcacgagctttccggaggtcaaagacagcgcgtaggt
attgcgcgagcgttgattttgcagccttctctgcttattgtggatgagccaacttctgcg
cttgacgtaacagtgcaacgttgtgtacttaacttattgcatgatttgcaacaaaaatac
cgttacgcatgcttgtttattactcatgatgttggcgttgtgcaagaagttgctagcgaa
gttgccataattagaaatggcagcgttcaatatatttcgtag
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