Gardnerella vaginalis 409-05: HMPREF0424_0609
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Entry
HMPREF0424_0609 CDS
T01146
Name
(GenBank) alpha amylase, catalytic domain protein
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
gva
Gardnerella vaginalis 409-05
Pathway
gva00500
Starch and sucrose metabolism
gva01100
Metabolic pathways
gva01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gva00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
HMPREF0424_0609
Enzymes [BR:
gva01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
HMPREF0424_0609
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Motif
Pfam:
Alpha-amylase
Alpha-amylase_C
Motif
Other DBs
NCBI-ProteinID:
ADB13796
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Position
667296..668951
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AA seq
551 aa
AA seq
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MIHSAQLQVSERKKSNYACELIDNYKRNVMCSFTAIAAVATVLMCIFAIVPNSSAFASTK
STDGLPPKGVIVTAFQQNWKSIAKECKQTYGPEGVSYVQVSPPQDHIKGTAWWTSYQPVS
YNLNSKLGTEDEFKNMITTCKAAGVGIVVDAVINHTTGDGNKDTVGVGDSKYDAANQSYP
DAGYTKDDFHQIDKDIYTYKDAQVVWNYRLVGLLDLDTSKPHVQKILGNYFAKLLKMGVA
GFRVDAAKHMCPEDVKGIKEAAAKAAGTKPENIWWMQETIGFPEQDPKIQPDQYVGTGEV
DEFEYSYRLRNYFYGSIENLSHITDQLIPNKKAAIFVTNWDTERDNSTRVLTYKDGAKYE
LANAFMLAYPYGTPNIYSGYKFTQRDDGAPGATDTHIPDVKCGKNSKWQCAQRWTSIRGM
IGFYNAVKGTKVTQWQDDNDNNIAFSRENKGFLAINNTDKPKNVSYKTDLPDGEYCNVYA
SRKCFSTVTVNGGKVETTIPAYSAIALHVKAVEHFGSTSTFSTVTMIVIVFAVLLIELAL
ILRKNKAGSNK
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgatccacagtgcacaattgcaagtaagtgagcgtaaaaaaagtaattatgcttgcgaa
ttaatcgataattacaagcgcaatgtaatgtgctcttttactgcaattgctgctgtagca
acagtattaatgtgtatttttgctattgtcccaaactcttcggcatttgcttcaactaaa
tcaacagacggtcttccgccaaaaggtgtgattgttactgcttttcagcaaaattggaaa
agtattgcaaaagagtgtaagcaaacttatggtcctgagggtgtgagttatgtacaggtt
tcgccgccgcaggatcatattaaaggtacagcgtggtggacttcttaccagccagttagt
tacaatctaaattcaaagcttggcactgaagacgagtttaaaaatatgattactacttgc
aaggctgctggtgttggaattgttgttgatgctgtaattaatcacacaaccggcgatggt
aataaagatactgtaggtgttggcgatagtaagtatgatgcggcaaatcaaagctatccg
gatgctggttacacaaaagatgattttcaccaaatagataaagatatttacacatataaa
gatgcgcaagtcgtttggaattatcgtttagttggtttgcttgatttggatacttctaag
ccgcatgtgcaaaaaattcttggtaactattttgcaaaattgctaaaaatgggtgttgca
ggctttagagttgatgccgcaaaacatatgtgtcctgaggatgtgaaaggcataaaagaa
gctgctgctaaagctgctggaacgaagcctgaaaacatatggtggatgcaagaaacaatt
ggtttccctgaacaagatcctaaaattcagccggatcaatatgttggtacaggcgaagta
gatgagtttgaatactcgtatcgcttgcgtaattatttctatggttcaattgagaatttg
tctcatattacagatcagcttattcctaataagaaagccgctatttttgtgactaactgg
gatactgagcgtgacaattcgactcgagttctcacttataaggatggagcaaagtacgag
ttagctaatgcttttatgcttgcttatccttatggaacaccaaatatttattctggatat
aagttcacgcagcgcgatgatggtgctcctggtgcaactgatacgcacattccagatgta
aagtgcggcaagaattcaaagtggcaatgcgctcagcgttggacttcgattcgtggaatg
attggattctataatgctgttaagggcacgaaagtgactcaatggcaagatgacaacgat
aataacattgcttttagtcgcgaaaacaagggattcttggcgattaacaatactgacaag
cctaaaaatgtgagttataaaactgatttgcctgatggtgagtattgcaacgtatatgct
tcacgtaaatgctttagcacagttactgtaaatggtgggaaagtagagacaactattcca
gcttattctgctattgctttgcatgttaaggctgtagagcattttggaagtacttccacg
tttagtactgttacgatgattgtaattgttttcgctgtgctattgattgaactagctttg
attttgcgcaaaaataaggcaggttctaacaagtag
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