Gardnerella vaginalis 409-05: HMPREF0424_0828
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Entry
HMPREF0424_0828 CDS
T01146
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
gva
Gardnerella vaginalis 409-05
Brite
KEGG Orthology (KO) [BR:
gva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gva03009
]
HMPREF0424_0828 (der)
Ribosome biogenesis [BR:
gva03009
]
Prokaryotic type
GTPases
HMPREF0424_0828 (der)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
Cytidylate_kin
KH_dom-like
FeoB_N
GTP_EFTU
Dynamin_N
RsgA_GTPase
Ras
AAA_18
Roc
AAA_28
AIG1
ABC_tran
AAA_16
AAA_22
AAA
Ploopntkinase3
Arf
NTPase_1
AAA_17
NB-ARC
SpoIVA_ATPase
ATP_bind_1
AAA_25
MeaB
Lmo2446_N_CBM-like
ADK
Motif
Other DBs
NCBI-ProteinID:
ADB13594
LinkDB
All DBs
Position
complement(938952..941156)
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AA seq
734 aa
AA seq
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MICVAIDGPAGVGKSSTSRALAQYYGFAYLDTGAMYRAAAWWCLKQGIDLSTKLELDEEG
NPVNPADTERFNQIIEAVGALFTESDADFSVDPKNPVVTVEGEDISEELRSSEVSSHVST
VSSIPAVRRMLIAAQRAYIASESDEDSFSGGEGIVAEGRDITTVVASNAQVRVLLTAREE
VRQARRNKQNIAQENLQNNESKNNESEEDDIHARDAKDAKVTHFLQAADGVTTLDNSDLT
FEQTLDALVEMVDAAIEQDEYDRYAANLEGYDLDDEDRALLRGDEVSQDDAKDSKAVGVI
AIIGRPNVGKSTLVNRILGHRVAVVEDTPGVTRDRVSYDAEWAGTNFKLVDTGGWEADVE
GIDSSIAQQAQIAVRLSDAVIFLVDGQVGLTATDERIVSMLRAAGKPITLAVNKVDDARS
EYLTAEFWKLGMGEPYGISAMHGRGVGDLLDAALNSLKKANKTSGFLTPEGLRRVALVGR
PNVGKSSLLNHLAHEERSVVNDLAGTTRDPVDEVVRVDGEDWLFIDTAGIKRRQHKLTGA
EYYSSLRTQAAIERSELALILFDSSQPIAEQDLKVMSQAVDAGRAIVLVFNKWDLMDEFS
RQRMERLWKTEFERVTWAERVNLSAKTGWHTNRLARAMRTALDSWDKRIPTGKLNAFLGR
IQSAHPHPLRGGKQARILFATQASTRPPRFVIFTTGFLEHGYRRFIERSLREEFGFEGTP
IQISVKVRDKKKRK
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
gtgatttgtgtagcaattgatggaccagcaggagtaggtaagtcttctacttctcgtgct
ttagcacaatactacggttttgcgtatttagatacgggtgcaatgtatagagctgctgct
tggtggtgcttgaaacaaggtattgatttaagcacgaagcttgaattggatgaagaagga
aatcctgtaaatccagcggatactgaacgttttaatcaaattattgaagctgttggagcc
ttatttactgaaagtgacgctgactttagtgttgatcctaagaatcctgtagtgactgtc
gaaggtgaggatattagcgaagaattgcgttccagcgaagtttcttcgcatgtgtctact
gtatcttcgattcctgcagttcgccgtatgcttattgctgctcagcgagcgtatattgct
tcagagtcagatgaagattctttctcaggcggagagggaatagttgcagaaggacgcgat
attactactgttgttgcttctaatgctcaagttcgagtgcttcttactgcacgcgaagaa
gtgcgtcaagctcgcagaaacaagcagaatattgcgcaagaaaatttgcaaaataatgaa
tctaaaaataatgaatctgaagaagacgatattcacgctcgtgacgctaaagatgctaaa
gttacgcattttcttcaagcagcagacggtgttacaacgctagataattctgatttgact
tttgagcagactctcgatgctcttgttgaaatggttgacgctgctatcgagcaagatgag
tacgaccgctatgctgctaatcttgaaggctacgatcttgacgatgaagaccgtgcgctt
cttcgaggcgacgaagtaagtcaagacgatgcaaaagactctaaagctgttggagtaatc
gccattataggtcgaccaaacgttggaaaatcaacgcttgtcaatcgtattttgggccat
cgtgtagctgttgtagaagatactccaggtgttacgagagatcgcgtaagctacgacgct
gagtgggctggaactaactttaagctggttgacactggcggctgggaagcagatgttgaa
ggcattgattcttctattgctcaacaagcgcaaatagcagtgcgtttaagcgatgctgtg
attttcctagtagatggtcaagttggtttaacagctacagacgagcgtattgtttcaatg
cttcgtgctgcaggtaagcctattactctggcagttaacaaggttgacgatgctagaagc
gagtatttgactgcagagttttggaagctcggaatgggtgagccttacggaatttctgca
atgcacggcagaggcgttggagatttgcttgatgcagctctcaattctttgaagaaagcg
aataaaacttcaggattcttaactccagaaggacttcgcagagttgctttagtgggtcgt
ccaaacgttggtaagtcttcgcttttgaatcatttagctcatgaagagcgatctgttgta
aacgatttggctggaactactcgtgaccctgttgatgaggttgtgcgagttgacggcgag
gattggctgtttattgacactgctggtattaagcgcaggcagcacaagcttacgggtgct
gaatactattcttcacttcgtacgcaagctgcgattgaacgctcggaacttgctttgatt
cttttcgattcttcccagcctattgcagagcaggatttgaaagttatgagccaggctgtg
gatgcaggtcgcgcaatcgtacttgtgtttaacaagtgggatttgatggacgaattttcc
agacagcgcatggaacgcttatggaaaactgagtttgagcgcgtaacttgggctgagcgc
gtaaatctttctgcaaaaacaggatggcatacgaatcgtcttgcgcgcgctatgcgaaca
gctttagacagctgggataagcgcattcctacaggcaagctcaacgctttcttagggcgt
attcagtctgctcatccgcatcctttgcgaggcggaaagcaagcgagaatcttgtttgcc
acgcaagcttctacgcgcccaccgcgttttgtaatatttacaactggcttcttagagcac
ggataccgtcgctttattgagcgatcacttcgagaagaatttggattcgagggaactcct
attcaaatctccgtaaaagtacgagataagaagaagcgcaaataa
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