Gardnerella vaginalis ATCC 14019: HMPREF0421_20313
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Entry
HMPREF0421_20313 CDS
T01344
Name
(GenBank) D-ala D-ala ligase N-terminal domain protein
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
gvg
Gardnerella vaginalis ATCC 14019
Pathway
gvg00470
D-Amino acid metabolism
gvg00550
Peptidoglycan biosynthesis
gvg01100
Metabolic pathways
gvg01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
gvg00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
HMPREF0421_20313
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HMPREF0421_20313
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
HMPREF0421_20313
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gvg01011
]
HMPREF0421_20313
Enzymes [BR:
gvg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
HMPREF0421_20313
Peptidoglycan biosynthesis and degradation proteins [BR:
gvg01011
]
Precursor biosynthesis
Amino acid ligase
HMPREF0421_20313
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
ADP38395
UniProt:
E3D8K1
LinkDB
All DBs
Position
376966..378111
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AA seq
381 aa
AA seq
DB search
MTKKRVVFLYGGKADEHSISCISAAGVLSAVDESRFEIVRIAITKQGEWIVGGEDPRNFR
MEEGELPVITKTAETRDVVLDPAKGADGFLVREADGTLTSLGHIDAVFPVLHGPNGEDGT
LQGLLEMMQVPYVGCGVLASAACMDKYYAKQLFKAAGIDVAPGIALDVRKFASDAANHFD
AYANEILEQVEEAKLEYPLFVKPSRAGSSFGVTKVESRDAKALADAVYEASKHDWRVLVE
QGIDAREIECAVLAARDGDEPQASWPGEVVLDKREAGEDQFYDFDSKYMDSAASHVEVPA
NLPEETLQRVRNTALAAFKAADGRGLSRVDSFVTPEGHVMINEINTMPGFTPISMYPKAW
EATGISYSDLITKLIEGVILD
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgactaaaaagcgtgtagtgttcttgtatggcggtaaagcagacgaacattcgatttct
tgcatatctgctgctggagtgctcagtgctgtagacgaaagtcgatttgaaatcgtgcgc
attgcaatcacaaagcaaggcgagtggattgttggcggcgaagatccgcgaaacttccgc
atggaagaaggagagcttccggtaataacaaaaaccgcggaaacgcgcgatgttgtacta
gaccctgcaaagggagcagatggatttttggtgcgagaggcggatggcacgcttacaagc
ttaggtcatattgacgcagttttcccagttcttcacggtccaaacggcgaagatggcact
ttgcaaggcttgctagaaatgatgcaagttccatacgttggttgcggagttttggcatcc
gccgcgtgcatggataagtattacgctaagcaactttttaaggcagcaggaattgatgtt
gctccaggaatcgcgctggatgtgcgaaagttcgctagcgacgcggcaaatcactttgat
gcgtacgcaaacgaaattcttgagcaagttgaagaagcaaaactcgagtatccgcttttt
gtaaagccaagccgagcaggatctagctttggcgtaacaaaagttgaatcgcgcgatgct
aaagctttagcagatgccgtttatgaggcttcaaagcacgattggcgagtattggtagag
cagggaattgacgcgcgcgaaatcgagtgcgctgttcttgcggcgcgcgacggcgacgag
cctcaggcaagctggcctggagaagttgtgcttgacaagcgcgaggctggagaagaccag
ttctacgattttgacagcaaatacatggattctgcagcttcacacgtggaagttccagca
aatctgccagaagaaactttgcagcgcgttcgcaatactgcgctcgcagcgttcaaagcg
gcagatggcagaggacttagtcgcgtggattcattcgttactccagaaggacatgtaatg
attaacgaaatcaacacaatgcctggatttacgccaatctccatgtatccaaaagcttgg
gaagcaaccggaataagctacagtgatttaatcacaaagcttattgaaggcgtgatttta
gactga
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