Gardnerella vaginalis ATCC 14019: HMPREF0421_20343
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Entry
HMPREF0421_20343 CDS
T01344
Symbol
infB
Name
(GenBank) translation initiation factor IF-2
KO
K02519
translation initiation factor IF-2
Organism
gvg
Gardnerella vaginalis ATCC 14019
Brite
KEGG Orthology (KO) [BR:
gvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
gvg03012
]
HMPREF0421_20343 (infB)
03029 Mitochondrial biogenesis [BR:
gvg03029
]
HMPREF0421_20343 (infB)
Translation factors [BR:
gvg03012
]
Eukaryotic type
Initiation factors
MTIFs
HMPREF0421_20343 (infB)
Prokaryotic type
HMPREF0421_20343 (infB)
Mitochondrial biogenesis [BR:
gvg03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
HMPREF0421_20343 (infB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IF-2
GTP_EFTU
IF2_N
GTP_EFTU_D2
Ras
MMR_HSR1
Roc
MMR_HSR1_Xtn
SRPRB
Motif
Other DBs
NCBI-ProteinID:
ADP38425
UniProt:
E3D8N1
LinkDB
All DBs
Position
417450..420383
Genome browser
AA seq
977 aa
AA seq
DB search
MVKKRVYELAKEFGVDSKTVLERLKSMGEFVKSASSTVEAPVARRLKTEFASAGSSSGSS
AAKNDAKPAANKNADNSSNKTNHSSNKSESLAQNNAEKRNLDKSSEKASEKQHSSQKSHD
NHDNSDNKENHSSSTPNGVIPKPSAGHVKPHAIANADSKRGGDKRGENRNDARGDKRGEN
RSSKSDRSSQMPPRPRPHQGAGSGSAPRPGNNPFSRKQGMRAPTPGDIPRPHPMSRPGAA
AENSRGAKPGQGGGNGNGGGRGRGGRGGARQGGGNGSNRSSQWSGSHRQGGGNGASSRPS
AESRFNANQAASFQAAAAGAPNAGPSRGSGRGRAGAAGAFGRQGGKSSKARKNRLAKRRE
YEELKAPVIGGVRIPSGNGATIRLRQGATLSDLAEKIDVNPAALVTVLFHLGEMATATQS
LDETTFQILGEEIGWNINLVSAEEEDKELLQQFDIDLDEEELQEDDNLVTRPPVVTVMGH
VDHGKTRLLDTIRKSNVVAREAGGITQRIGAYQVTVTLDGDKRKITFLDTPGHEAFTAMR
ARGAELTDVAILVVAADDGVMPQTVEAINHAQAAHVPIVVAVNKIDVAGANPDKVRGQLT
EYGLVPEEYGGDTMFVNISAKQGTNVDKLLEAVLLTTDAELDPKANPNMDARGATVEARL
DKGRGAVATVLVQQGTLKVGDSIVAGTSYGRVRAMLDENGNHLQEAGPSTPVQVLGLTSV
PTAGDLFLVTSDDRSARQIAEKRQATERAAQLAKRRKVVSLESLKEQFAKSEVDMLNIVI
KGDSSGSVEALEDSLMKIEVSDEVGIQVIHRGVGAITQNDVNLATVDKAVIIGFNVRPNR
QVADLADREGVEVKYYSVIYKAIEDIEAALKGMLKPEFEEVVTSHSEIREIFRSSKFGNI
AGVMVQDGEVKRGTKCRILRNGVATVNDLEISSLRRFKDDVQSVSEGYEAGINLGSFNDI
ELGDIIETFEMKQIERK
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
gtggtaaaaaagcgcgtatacgaactagctaaagagtttggtgtagacagcaaaaccgtg
ttggagcggttgaagagcatgggcgaatttgttaagtccgcgtcttcaacagtagaggct
cctgttgcacgtagattaaaaacagagtttgcgtccgctggatcatcttctggatcgtct
gctgcaaagaatgatgcgaaacctgctgcaaataagaatgctgataattcttcgaataag
actaatcattcttctaataaatcggagtcgttggctcagaataatgctgaaaaacgaaat
ttggataagtcttcagaaaaagcttcggaaaaacagcattcttcgcaaaagtcacatgat
aatcatgataatagtgacaataaagaaaatcattcatcttccactccaaatggtgtaatt
cctaagccttctgctggtcacgtaaagccacatgctatcgctaacgctgattctaagcgt
ggaggcgataagcgtggcgaaaatcgtaacgatgcacgaggcgataagcgcggggaaaat
cgttcttctaagtcagatcgttcttctcagatgcctccacgccctcgtccgcatcagggt
gctggctctggttctgctcctcgtccaggtaacaatccgttcagccgaaagcaaggtatg
cgcgctcctacacctggtgatattcctcgtcctcacccaatgtcacgtccaggcgctgct
gcagaaaattctcgtggagcaaagcctggtcagggcggcggtaatggcaacggcggtggt
cgcggtcgcggtggtcgcggaggcgctcgtcagggcggcggtaatggttcgaaccgctct
tcgcagtggtctggttcacatcgtcagggcggcggtaatggcgcaagctctcgtccgtct
gcagaatcgcgctttaatgcaaatcaggctgcaagcttccaagctgcggctgcaggcgct
ccaaatgctggtccatctcgtggcagtggtcgcggtcgcgcaggtgctgcaggcgcattt
ggtcgtcagggtggaaagtcctctaaggctcgcaagaatcgtcttgcaaagcgcagagaa
tacgaagagcttaaagcaccagtgattggcggcgtgcgtattccttctggaaatggcgct
acgattcgacttcgtcaaggtgcaacgctttctgatttggcagaaaagattgatgtaaat
ccagctgctttggtaaccgttttgttccatcttggagaaatggctacagctactcagtct
ttggatgaaacaacattccagattcttggcgaagaaatcggttggaatatcaatctcgtt
tctgcagaagaagaagataaagagcttcttcaacagttcgacattgatttggatgaagaa
gaacttcaagaagacgataatcttgtaactcgtcctccagttgttactgttatgggtcac
gttgaccatggtaaaactcgtttgcttgatactattcgtaagtcgaatgttgtagctcga
gaagctggtggaattactcagcgtattggcgcttaccaggttacggttactttagatgga
gacaagcgcaagattacgttcttggataccccaggccacgaagcatttactgctatgcgt
gctcgtggtgcagagcttacagacgttgcaattcttgttgttgcagcagacgacggcgtt
atgcctcaaactgttgaagcaattaaccacgcgcaggctgctcacgtgcctattgttgtt
gcagtaaacaagattgatgttgctggagcaaacccagataaggttcgcggtcagcttaca
gagtacggtcttgtgccagaagaatacggcggcgacaccatgtttgtgaatatttccgca
aagcagggaaccaacgtagataagcttcttgaggctgttcttttgacaactgacgctgag
cttgaccctaaggcaaatccaaacatggatgctcgtggtgcaaccgttgaagctcgactt
gataagggtcgtggcgctgttgctactgttcttgttcagcaaggcactcttaaagtcgga
gattctattgttgcaggtacgtcttatggtcgtgttcgcgcaatgctcgacgaaaatggc
aaccacttgcaagaggcaggtccttctacgccagttcaggtgcttggtttgacttctgtt
ccaactgcaggagacttgttcttagtcacatccgacgatcgttccgctcgtcagattgcc
gaaaagcgccaagctacagagcgtgcagctcagcttgctaagcgtcgcaaggttgtgtct
cttgaaagccttaaggaacagttcgctaagtccgaagttgatatgctcaacattgttatt
aagggcgattcttctggttctgttgaggctttggaagattccttgatgaagattgaggtt
tccgacgaagttggaattcaggttattcaccgcggtgttggtgcaattactcagaatgat
gtgaacttggcaacagttgataaggctgtgattattggcttcaacgtgcgtccaaaccgt
caggttgccgatttggcagaccgcgagggcgtggaagtcaagtactactcggttatttac
aaggctatcgaagatattgaagctgctttgaagggtatgcttaagccagagtttgaagag
gttgttacttctcactctgagattcgtgaaatcttccgttcttccaagtttggcaatatt
gctggtgttatggttcaagacggcgaagttaagcgcggtacaaagtgccgtattttgcgt
aacggtgttgctactgttaacgatcttgaaatctccagcttgcgtagattcaaggatgat
gttcaatccgttagcgaaggctacgaggcaggcattaaccttggcagctttaacgacatt
gagcttggcgatataatcgaaacctttgaaatgaagcagattgagcgcaagtaa
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integrated database retrieval system
