Gardnerella vaginalis ATCC 14019: HMPREF0421_20579
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Entry
HMPREF0421_20579 CDS
T01344
Name
(GenBank) alpha amylase, catalytic domain protein
KO
K01176
alpha-amylase [EC:
3.2.1.1
]
Organism
gvg
Gardnerella vaginalis ATCC 14019
Pathway
gvg00500
Starch and sucrose metabolism
gvg01100
Metabolic pathways
gvg01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gvg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
HMPREF0421_20579
Enzymes [BR:
gvg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.1 alpha-amylase
HMPREF0421_20579
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Motif
Pfam:
Alpha-amylase
Alpha-amylase_C
Motif
Other DBs
NCBI-ProteinID:
ADP38661
UniProt:
E3D9B7
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Position
717873..719558
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AA seq
561 aa
AA seq
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MMIHGIEVFTSFNKKALVKLKFVLARVAAITSCVAMILAGAVVASSPAIADEGAKSSQKT
TQKGVIVTAFQQNWRSIAKECKKTYGPEGVKYVQVSPPQDHIKGDQWWTSYQPVSYKLNS
KLGTEDEFKKMITTCKASGVGIIADAVINHTTGFANKDAVGIGGSKYDAANQSFPDAGYT
KDDFHKSTENINTYRKAEIVWTHRLVGLLDLDTSNPHVQKTLGEYFAHMLKLGVAGFRVD
AAKHMSPQDVKGIKDAAAEAAGTTPDKIWWMQETIGFSEQDPRIQPDQYLQTGEVNEFEY
SYRLRNYFYGSIENLKHITDKLIPSKKAAIFVTNWDTERDNASRVLTYKDGKKYELANAF
MLAYPYGTPNVFSGYEFTKRDEGAPGATQTSIPDVSCAKDSKWQCTQRLTSIRGMIGFYN
AVRGTKVTNWQDDDDNNVAFSRGNKGFLAINNTEEPQKVSYKTDLPDGEYCNVYESKDCT
KTVSVSGGKVKTTVDAESAVALHVNAVKSLGNARARNVTIFICVFVASICTFVVNRRFVE
KSKKLAKGNSDGVKTGETKGK
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgatgatccacggcatagaagtatttacgagcttcaataaaaaggcgcttgtaaagtta
aagtttgtgttggcaagagttgcggctataacatcttgcgtcgctatgattttggctgga
gcagtagtcgcaagcagcccagcgattgcagatgagggtgcaaaatcatctcaaaaaact
acacaaaaaggtgtaatcgtaacagcgttccaacaaaattggagaagtatagctaaggaa
tgcaaaaaaacgtacggcccagaaggcgtaaagtacgtacaagtatcacctccgcaagat
catattaaaggtgaccaatggtggacaagctatcaacctgtaagctataagctaaattca
aaacttggcacagaagacgagtttaaaaagatgattacaacgtgcaaagcttcgggtgtt
ggaattattgcagatgcggtaataaaccacacaactggttttgcaaacaaagacgctgtt
ggtattggtggaagcaagtatgatgctgcaaatcagtcgttcccagatgcaggatataca
aaagacgattttcataagtcaacagaaaatatcaacacgtatcgaaaagcagaaatcgtt
tggacgcatcgacttgttggactgttggatttagacacttctaatcctcatgtgcaaaaa
actttgggagagtactttgcgcatatgttaaagcttggagtggctgggtttagagttgat
gctgcaaaacacatgtctccgcaagatgtaaagggcataaaagatgcagctgcagaggct
gctggaacaacgccagataagatttggtggatgcaagaaacaatagggttttctgagcaa
gaccctagaattcagccagaccaatatttgcaaactggtgaagtgaatgaatttgagtac
tcttataggcttagaaactatttttatgggtctattgagaatcttaaacatatcacagat
aagttaattccaagcaaaaaagctgcgattttcgttacaaattgggatactgagcgagat
aatgcaagcagagttttgacgtataaagatggtaaaaaatacgagcttgcaaacgcgttt
atgttggcgtatccatatggaactccaaatgtgttttctggttatgagtttacaaaacga
gatgagggagcacctggagctacgcaaacttcaattcctgatgtgagttgtgcaaaggat
tctaagtggcaatgcacgcaaaggctaacttcgattcgcggaatgattgggttctacaac
gccgttaggggcactaaggttactaattggcaagatgatgacgataataacgttgcattt
agccgaggaaacaagggttttcttgcgattaataatacggaagagccgcaaaaagtgagt
tataagactgacttgccagatggtgaatattgcaatgtttatgagtctaaagattgtact
aaaactgtgagcgttagtggcggaaaagtaaagaccactgttgatgcggaatctgctgtt
gctcttcatgttaatgctgtaaaaagtcttggaaatgctagagctagaaacgttacaata
tttatttgcgtgtttgttgcgtcaatttgtacgtttgttgttaatagaagatttgttgaa
aaatcgaagaagcttgccaaaggcaatagtgatggtgttaaaacaggtgagactaaaggt
aagtga
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