Gardnerella vaginalis ATCC 14019: HMPREF0421_20921
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Entry
HMPREF0421_20921 CDS
T01344
Name
(GenBank) cyclomaltodextrinase
KO
K01208
cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:
3.2.1.54
3.2.1.133
3.2.1.135
]
Organism
gvg
Gardnerella vaginalis ATCC 14019
Pathway
gvg00500
Starch and sucrose metabolism
gvg01100
Metabolic pathways
gvg01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gvg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
HMPREF0421_20921
Enzymes [BR:
gvg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.54 cyclomaltodextrinase
HMPREF0421_20921
3.2.1.133 glucan 1,4-alpha-maltohydrolase
HMPREF0421_20921
3.2.1.135 neopullulanase
HMPREF0421_20921
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Alpha-amylase_N
Malt_amylase_C
Glyco_hydro_31_2nd
Motif
Other DBs
NCBI-ProteinID:
ADP39003
UniProt:
E3DAA9
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Position
complement(1128078..1129841)
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AA seq
587 aa
AA seq
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MINRQAILHRPLSQYAYSTAEYCLTIRLRAAKNNLCSCVLHYGNRVDLTPLDQFCTLKME
KIASDDYFDYYEANISSDLDRVCYYFEMQDADERLYLYADTIATDFPEDRTEVYQFPFIR
REEISDVPNWLKEAVVYNIFPDSFADSKRGISCEAKDYFDEKTGQTLHTRLGGTIRGIIE
NLDYIEDLGFNCLYLNPIFKAAEYHRYDLLDYYHVCPNLGTDDDFRELVSEVHNRGMHII
IDGVFNHSSWYFFAFDDVVKNGENSRYKDWFYGLKFPVKRPEDGKRPSYTCFAYERKMPK
LNTSNPEVRDYFMDVCRYWLEDFDVDGWRLDVANEVDKDFWRAFRSVAKKTKKDSVLIAE
IWENSERWLQGDMFDSTMNYEFRKVCRDFFAFGKINAREFNSRFVDMLLRYPFPIVQGQL
NLLDSHDVSRFRSLCAQSSSEACDFSTADKRFRLAELCLLTSVGAPSVFYGDELGVIGFE
ECDYRAPMPWSNPVSDNRDLFRELIKLRKNNDCFIHGNFRVLDYDERGKFVFARETDSKR
VVVALNAFNESNDSFSALPDCKPIISYNYDAQNQSLGAFGYAIFEVK
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgataaatcgtcaagcaatattgcaccgaccactttcacaatatgcgtattctacggca
gaatattgtttaacaattcgcttgcgtgcggcaaagaataatctttgttcatgcgttttg
cattacggaaatcgcgtcgatttgactccgttagatcagttctgcacgctgaaaatggaa
aagattgcgagcgacgattactttgactactatgaagcaaacataagcagcgatttagat
agagtttgttattactttgagatgcaagatgcggatgagcgcttgtatttgtacgccgat
actattgcgactgattttccagaagatcgtacagaagtctaccagttcccatttattcgc
cgcgaggagattagcgacgttcctaattggcttaaagaggctgttgtttataacattttc
ccagatagttttgcagattctaaacgtggcataagttgcgaggcaaaagattattttgat
gagaaaactggccaaactttacacactcgtttaggtggaaccattagaggaataatcgaa
aatcttgattatattgaggatttgggctttaattgcttgtatttaaatcctatttttaaa
gctgcagaataccatcgttacgatcttcttgactactaccatgtttgccctaatttagga
acggacgacgattttagggagcttgttagcgaggttcataatcgcggcatgcacataatt
attgacggcgtttttaatcattctagttggtatttcttcgcgtttgacgatgttgttaaa
aatggcgaaaattcgcgatacaaggattggttctatggattaaagttccctgttaagcgc
cccgaagatggtaagcgcccaagctacacgtgttttgcgtatgagcgtaaaatgccaaag
ctcaatacttctaatcccgaagttcgcgactattttatggacgtttgccgctattggctt
gaagattttgatgttgacggttggcgtttggatgttgcgaatgaagttgataaagacttt
tggcgtgccttccgctctgttgctaaaaagactaaaaaagatagtgtgctaattgctgag
atttgggagaattctgagcgttggctacaaggagacatgtttgactccactatgaactac
gaattccgcaaagtttgccgcgatttctttgcttttggcaagattaatgcgcgcgagttt
aatagtcgatttgtagatatgcttttaagatacccattcccgattgttcaaggtcaattg
aatttgcttgatagccatgacgttagtcgctttagaagcttgtgtgctcaaagctcttcg
gaagcttgcgacttttctacggcagataagcgattccgcttggctgagctttgtttgctt
acatctgttggagccccaagcgtgttctatggtgatgagcttggtgtaattggttttgaa
gagtgtgattatcgagcgcctatgccttggtcaaatcctgtcagcgataatcgtgattta
ttccgcgaacttataaaattgcgtaaaaataacgattgctttattcatggtaattttaga
gttcttgactatgatgagcgcggaaagtttgtgtttgcgcgagaaactgactctaagcgt
gttgttgtagctttaaatgcgtttaatgaatctaacgattcgtttagtgctttgcctgat
tgtaagccgattattagctacaattatgatgctcaaaatcaatctcttggagcttttgga
tacgcgatttttgaagtaaaatag
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