Gardnerella vaginalis HMP9231: HMPREF9231_0106
Help
Entry
HMPREF9231_0106 CDS
T01939
Name
(GenBank) putative neopullulanase
KO
K01208
cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:
3.2.1.54
3.2.1.133
3.2.1.135
]
Organism
gvh
Gardnerella vaginalis HMP9231
Pathway
gvh00500
Starch and sucrose metabolism
gvh01100
Metabolic pathways
gvh01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
HMPREF9231_0106
Enzymes [BR:
gvh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.54 cyclomaltodextrinase
HMPREF9231_0106
3.2.1.133 glucan 1,4-alpha-maltohydrolase
HMPREF9231_0106
3.2.1.135 neopullulanase
HMPREF9231_0106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
TFIID_NTD2
Motif
Other DBs
NCBI-ProteinID:
AEF31322
LinkDB
All DBs
Position
119524..120903
Genome browser
AA seq
459 aa
AA seq
DB search
MSIPQWLPDARFYQIFPDRFYRCEGYGMLTEGHVPLDPWDAEPTRENFLGGNIAGITEKL
DYIHDLGCNALYLNPIFSAATNHRYDANDYFKIDPLLGTLEDFHTLVDEAHKRNIRIVLD
AVLNHCGKTHWMFQDVVKNEENSEYVNYFSVKNFPVKSLPVPNYKTCSGCEYLPKWNVFN
PKVREHHFNVARYWIDQGIDGYRLDVPYFIYPEFWQDFRQVVKSKNSELCLIAEEWRDPA
QWLQGDTTDSTMNYTLRDLVLGFTATKRFNAYDFVNGINRLQERIPYGYHHGMMNLLGSH
DTERVLTAHQNNTEDCITAYCCMFACEGAPMIYYGDELGMVGDNDPGCRSGMQWDSLDTN
AEIFRTIVQLNALRRDHIALRRGTQSCYAVDGDTVIISREHKEESLLMIISRSNLLEYNS
SRLPQQLQNHNWRIINGVTVGDSWRPNKDNSMIVLQAQQ
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtctataccacagtggttgcctgatgcaagattttatcagatttttcctgatcgtttc
tatcgttgtgaaggctacggtatgctaactgaaggtcatgtgccgcttgatccatgggat
gctgagcctacgcgtgagaatttcttaggtggtaatattgctggaattacagaaaaactt
gattatattcatgatttaggttgcaatgcgctctatttgaatccaattttttctgctgca
acaaatcatcgttatgacgcaaacgattattttaaaatcgatccacttttaggaactctt
gaagatttccatacattggtagatgaagcgcataagcggaatatacgtatagtactagat
gcagttttaaatcattgtggtaaaactcattggatgtttcaagatgttgttaaaaatgaa
gagaattcagaatatgttaattatttttcagtgaaaaactttccagttaagtcattgcct
gtgcctaattataaaacctgttctggttgtgaatatctaccgaagtggaatgtgtttaat
ccaaaggtgcgtgagcatcattttaatgttgcgagatattggattgatcaaggtatcgac
ggttatcgtcttgatgttccatattttatttatccagaattttggcaggattttaggcaa
gttgttaaatcaaaaaattcggaattatgtttgatagctgaagaatggagagaccctgct
caatggttgcaaggagacactactgatagcacaatgaattatactctgcgtgatttagtt
ttaggttttacggcgacaaagcgattcaatgcatacgattttgttaacggtattaatcgt
ttgcaggagcgcataccgtatggatatcaccatgggatgatgaatttgttgggtagtcac
gatactgagcgtgttttaactgcgcatcaaaataatactgaggattgcataactgcctac
tgttgcatgtttgcctgcgaaggtgctccgatgatttattacggtgatgaacttggtatg
gttggcgataatgatccagggtgccgttctggtatgcagtgggatagtcttgatacaaat
gctgaaatattccgtacaattgttcaattaaatgcattgcggcgtgatcatattgcgttg
cgaaggggtacgcaaagttgttacgctgttgatggagatactgtcattatttcgcgggag
cataaggaagaatctcttttgatgattatttcacgtagtaatttattagagtataattca
tcgaggctacctcaacaattgcaaaatcataattggcgaattataaatggtgtaactgtt
ggagatagttggcgccctaataaagataattctatgatcgtattgcaggctcaacagtaa
DBGET
integrated database retrieval system
