Gardnerella vaginalis HMP9231: HMPREF9231_0306
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Entry
HMPREF9231_0306 CDS
T01939
Symbol
pulA
Name
(GenBank) pullulanase, type I
KO
K01200
pullulanase [EC:
3.2.1.41
]
Organism
gvh
Gardnerella vaginalis HMP9231
Pathway
gvh00500
Starch and sucrose metabolism
gvh01100
Metabolic pathways
gvh01110
Biosynthesis of secondary metabolites
Module
gvh_M00855
Glycogen degradation, glycogen => glucose-6P
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
HMPREF9231_0306 (pulA)
Enzymes [BR:
gvh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.41 pullulanase
HMPREF9231_0306 (pulA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
PUD
CBM_25
Alpha-amylase_C
CBM_48
Pullul_strch_C
CBM53
pulA_all-beta
Motif
Other DBs
NCBI-ProteinID:
AEF31029
LinkDB
All DBs
Position
350932..356970
Genome browser
AA seq
2012 aa
AA seq
DB search
MVAHRHLASKIVSMIAASAMLITGFAVVGNASASSESSSESSNPQSSNLTLNRKGVIVTA
FQQNWKSIAQECKTTYGPEGVKYVQVSPPNEHVKGTQWWTSYQPVSYKLKSKLGTENEFK
SMIDTCKVAGVEIIADAVINHMTGAGDTHTEGVGGSQYSAAKEDFPDAGYKKDDFHQDAR
NIEHYNNAEEVWNRRLVGLLDLDTSKQHVRETLGKYFAHLLKLGVAGFRIDAVKHISPTD
MAAIKKAAADAAHTTPDKIWWMQETIGNPSEAKEIQPDKHLNEGEVNEFQYSYRLKNDFY
GSISNLKNITNGLVPSDKASIFVTNWDTPRENYVRTLTYKDGPRYELANAFMLGYPYGNP
NIYSGYRFENGHKDDGAPGATEDKVEDVDCSPITGWQCTQRWTSIRGMVGFFNAVNGAQV
TNWQESDNNNIAFSRAGKGFLAINNTPNAKKVLYTTDLPNGEYCNVYAAGNCSKTVKVTD
GKVAATIAPYSAIALHVDSKADSASKAGPARDESDPKYNVDDAKDQSTTVYFNAKNKAGN
PSSVNIHYQIGNGSWTAVPGRPMRKVCNDWFARTIPNNGKQITAVFNDGGSNWYNKNNKS
RENFEIQAGSKTYVVDADLNGSESASIPCKVEDTSSKPTELKTKIVIHYKQKYGDNRHMG
VYIWGLKNADGQEIKGAWHEFNGQDAFGKTYAVEADGTYESGKVGFIITEKPVDGQDWHK
DGGDRNIWQIEYGVGEAWVYGGDSNTFAEPPSEVSNKLNSIKTLNVTVHYRRTNKDYAGW
NLWTWYGSEKGVKQDFTAHDDFGKIAEYTFHNDSGIKDSKFIVRYSMQGNDWVSKDPGEG
DRPIPAKAITLSEDGNTGNAEIWLMQGDSRVYLSPNVINTKANAINADITSFKEFTVNVS
VDPSEVEKKNVTVTDVTDSKKNQHKTVDISQVAVVDNRIVITAKNELDLKKMYEINIKGV
GGMPKTVSASTVKGSKIVRTDEFDQKYAYTGDDLGAVVKDGSTTFKLWAPTAAKVELVTY
KSTDEKAQEDKKQDMTLGTEDGKLGVWSITTSYAKAGTAYTYKVYFADGTVNNSPDPYAK
AAVRNGMRSVVFGGNMATPVFRKASFGKRPTDATIAEMNIRDFSIHESSGVDVAKRGKYL
GVIQSGAKKDGKPTGFDYLKSLGITHVQIMPMYDFGSVNEAGDLSYVDKNDKDNPHQNWG
YDPINYNVPEGSYASDSANPATRITELKQMVEGLHKAGLRVIMDVVYNHVYNAEKNAFGQ
TVPGYYFRYNDDGSLSNRSGCGNDTASERKMMRKYIVDSVKYWAKEYGIDGFRFDLMGLI
DLETIKEVREAIHAIDPNSIILGEGWDMSQLPYGNRTIQPNAYKLAENNGVAFFNDSFRD
AVKGQGDDDVAGFVSGNRGSDNLVMQNLYGCQPGNASCTGRRYANAGQTVQYVEAHDNLN
LYDKLKKSLPNESEENLKKRVMLANSLVMFAHGMPFFELGQEFLRSKNGNANSYNAGDGD
NSVKWDLVKTNEDAVEYFKALIKLRNEIPALRDSEYSDVNNNMHWIKSSDGINAFSVDNN
GKTYVFIFNANSGEFTVNIGKGKYRVRIADGKANSNDESVCPEASVDDNGNYKVSALSTS
VLVKDAEKKNDNPFANINVDDVLKYKMNPLDINKLKDESKPGTQKPNPSTPGHEQTPGTV
TPSPQPPVPGPVVPNPAPAPGPHPQPGSNTVNPAPQPAPVPTPTPGETHPGTHEPNSSTP
GREQTPGDSDTENHPAPHTLVPDVGTAPSNSESGSASQQGSKSNTPAHEPNNSIESKPNA
ESHSTSEYQTHSKPKQNVHENSDQSKPAKTKPESSSNSAVSAPAKPSSAAPTPTAPATVQ
QLKSELRGTLLVRDNNVANAGVVNKVSIRIQNGEFIERLNREGIAYAYAYIYSSPRLLKG
SDGSKYVTVRMVNGVPQFDAIFPAGYYGKHTVLLVDESGKQIAWTEVTVVDNGVSKRGGS
MLQTGSNIVYTFALFIILTFVAAIARYKVAFR
NT seq
6039 nt
NT seq
+upstream
nt +downstream
nt
atggtcgctcatcgccaccttgcgtcgaaaatagtttctatgattgcagcgagtgcaatg
ttaataacaggttttgctgttgttggcaatgcaagcgctagtagtgagtctagtagtgaa
tctagtaatcctcaatctagcaatctaactcttaaccgtaagggcgttattgttactgca
ttccagcagaattggaagagtattgctcaagaatgcaaaacaacttatggtcctgagggt
gttaagtatgtgcaggtgtctcctccaaatgagcatgtaaagggtactcagtggtggact
tcttaccagcctgtgagctataaattaaagtcaaaactcggtactgaaaatgagtttaag
agcatgattgacacttgcaaagttgcaggcgttgaaatcattgcggatgctgttattaat
cacatgactggtgctggtgacactcatacagagggtgttggtggaagccaatatagcgct
gctaaagaagatttcccagatgctggatataaaaaggatgatttccatcaagatgctagg
aatattgagcactataacaatgctgaggaagtgtggaatcgcaggcttgttggcttgctt
gatttggatacgtcaaagcagcatgtgcgagagactttaggtaagtactttgctcatttg
ctcaagcttggtgttgctggcttccgtatcgacgcagtaaaacatatttctccaacagat
atggctgcgattaagaaagctgctgctgatgctgcgcacactacgcctgacaagatttgg
tggatgcaggagacgattggcaatccttctgaagctaaagaaatacagccagataagcat
ttaaacgaaggcgaagtcaacgaattccaatattcttaccgattaaagaatgatttttat
ggctcaatatcgaatctaaagaatattactaatggacttgttccaagcgataaagcttca
atttttgttactaattgggatactcctcgagaaaattatgtgcgcacgcttacctataag
gatggtcctcgctacgagcttgcaaatgcgtttatgcttggctacccttacggaaaccca
aacatttactcggggtataggtttgagaatggtcataaggatgatggtgcgcctggagcg
actgaagataaagttgaagatgtagattgttctccaataactggttggcagtgcactcag
cgttggacttcgattcgtggaatggttggcttctttaatgctgtaaatggtgctcaagtc
actaattggcaggagagtgacaataataacattgcatttagccgcgcaggcaagggcttc
ttagcaattaacaatactccaaacgcaaagaaagttttgtatactactgatttgccaaat
ggtgagtattgcaacgtttatgctgcggggaattgctctaagactgttaaagttacagat
ggcaaggttgctgcgactattgctccttattctgcaattgctttgcatgtggattctaaa
gcagatagcgctagtaaagctggtccagcacgtgatgaatctgatccaaaatacaatgtt
gacgatgctaaagaccagtcaacaactgtctattttaatgctaaaaataaagcaggtaat
ccaagttctgtaaatattcattatcaaatcggcaatggatcttggactgcagttcctggt
aggccaatgcgcaaagtttgcaatgattggtttgcaagaacaattcctaataatggcaag
caaattactgctgtatttaatgacggtggaagtaattggtataacaagaacaataagtct
agagaaaactttgaaattcaagctggttcgaaaacttatgtagtagatgccgatttgaac
ggttctgaatctgctagcattccttgcaaggttgaggacacatcttcaaagcctactgaa
ttaaagacaaagattgttattcactataagcaaaaatatggtgacaatcgccatatgggc
gtctatatctggggtcttaaaaatgcagatggtcaagagataaaaggtgcttggcatgaa
ttcaatggtcaagacgcttttggtaagacttacgcagttgaagctgatggcacttacgag
agcggaaaagtcggatttattattaccgagaaacccgttgatggtcaggactggcataag
gacggcggagatcgtaatatctggcaaatcgaatatggtgttggcgaagcttgggtttac
ggaggagattcaaatacttttgcagaacctccatctgaagtctctaacaagcttaatagc
attaaaacattaaatgttactgttcactaccgcagaacaaataaggattacgctggttgg
aatctttggacttggtacggtagtgagaagggcgtaaagcaagattttacggctcatgat
gatttcggtaagattgcagaatatacattccacaatgattctggcataaaagattcaaag
tttattgtgcgctattctatgcaaggcaacgattgggtttctaaagatcctggcgaaggc
gatcgcccaattcctgcaaaagcaattaccttaagcgaagatggtaacactggtaatgct
gaaatctggcttatgcagggcgatagtagagtttacttaagcccaaacgtaatcaacacg
aaggctaatgctattaatgctgatattacgtcttttaaggaatttactgtaaacgtgagc
gtcgacccttcggaagttgagaagaaaaatgttactgtaactgatgttacagattcaaag
aaaaatcaacacaagacagtagatatttcgcaagttgctgttgtggataataggatcgta
atcactgcaaagaacgaattagatcttaagaaaatgtatgaaatcaacattaagggtgtt
ggtggaatgcctaaaacagtgtctgcttcaactgttaaaggttctaagattgttcgcact
gatgagtttgatcaaaagtatgcgtacacaggtgatgacttgggtgctgttgtaaaagat
ggttctacgactttcaagctttgggcgccaactgctgcaaaagtggagttagtaacttat
aagtcaactgatgaaaaagcgcaagaagataaaaagcaagatatgactcttggcacagaa
gatggaaagcttggcgtgtggagtattactacgagttatgcaaaagctggcactgcttat
acatacaaggtttattttgcagatggcactgttaataattctccagacccttatgcaaaa
gctgctgtgcgaaatggaatgagatccgttgtattcggtggcaatatggcaacacctgta
tttcgtaaggcatcatttggaaagcgtccaactgatgcgactattgcagaaatgaatatt
cgcgacttttcgattcatgaaagttctggcgtagatgttgcaaagcgcggaaagtatctt
ggtgtaattcaatctggtgctaaaaaagatggcaagccaactggctttgattatttgaag
tccctcggcatcactcatgtgcaaatcatgccaatgtatgattttggttctgttaatgaa
gcaggagatttgagttatgttgataagaacgacaaagataatcctcatcaaaactggggc
tatgatccaataaactacaacgttccagaaggctcctatgcgtctgattcagcaaatcct
gctacgcgcattactgagctaaagcaaatggttgaaggtctacataaggctggtttgcgc
gtgattatggacgtggtttataaccatgtttataacgcagaaaagaacgcttttggacag
actgtgccaggctactacttccgttacaacgatgacggcagcttgtctaatagatctggt
tgcggaaacgatactgcttcagagcgcaaaatgatgcgaaagtatattgttgactctgta
aagtattgggctaaagagtacggtattgacggcttccgttttgatttgatgggattgatt
gaccttgaaaccattaaggaagtgcgtgaagctattcatgcaattgacccgaactcgatt
attcttggcgaaggctgggatatgagccaattgccttatggaaaccgcactattcagcct
aatgcgtataagcttgctgaaaataatggcgttgcgttctttaacgattccttccgtgat
gctgtaaagggtcaaggagatgatgatgttgctggattcgtgtctggaaacagaggcagc
gacaatctagttatgcaaaatctttacggctgccagcctggaaacgcaagctgcactggt
aggcgctacgcgaatgctggtcagactgtgcaatatgttgaagctcacgacaatcttaat
ctttacgataagttgaagaaatctttgcctaatgagtcagaagagaatcttaagaagcga
gtaatgcttgctaattctcttgttatgtttgcgcatggcatgccattctttgagcttggt
caagagttcttacgaagcaagaatggtaatgctaatagttacaatgctggcgacggcgac
aattccgttaagtgggatctagttaaaacgaatgaagatgctgttgagtacttcaaagcg
ttgataaagctaagaaacgagattccagctttacgagattctgaatattctgatgttaac
aataatatgcattggattaagagcagcgatggtattaacgcatttagtgttgacaacaac
ggtaaaacgtatgtgtttattttcaatgctaatagtggtgaatttactgtgaatattggc
aaaggaaagtatcgcgtgcgcattgctgatgggaaagctaacagcaatgatgagtcagtg
tgtcctgaagcatctgtagatgacaatggaaattacaaggtttctgctctttcgacttca
gtacttgtgaaggatgctgaaaagaagaacgataatccttttgcaaatattaatgttgat
gatgttctcaaatataagatgaatcctttggatatcaataagttgaaggatgaatctaag
cctggtacgcagaagccgaatccatctactcctgggcatgaacaaactcctggtactgtt
actccatcacctcagccacctgttcctggtcctgtagtgccaaatccggctccagcgcct
ggccctcatcctcagcctggttctaatactgtgaatccggctcctcagccagcgccagtt
ccaactccaactcctggagaaactcatcctggaactcatgagccaaattcatctacgcct
ggtcgtgagcaaactcctggagactctgatactgaaaatcatcctgctccacatacttta
gtcccagatgtgggtactgctcctagtaattccgaatcaggttctgcatcccagcaaggc
tctaagtctaatacgcctgctcatgaacctaataatagtattgaatctaagcctaatgct
gagtctcactctacttctgaatatcaaactcattcaaaacctaagcagaatgtgcatgaa
aattcagatcagtctaaaccagctaaaacaaaacctgaatcttcctcaaattctgctgta
tctgcgcctgctaagccatcatcagctgctccaactcctactgcaccggcaacagtgcag
cagcttaagtcagagctaagaggaactctgctagtacgagacaataatgttgcgaatgct
ggagttgtgaacaaagtaagcattcgcattcaaaacggcgagtttattgaacgtctgaat
cgtgaaggtattgcatatgcttacgcatacatctactcgtctccgcgattgcttaaaggc
tccgacggttcaaagtatgttactgtacgaatggtgaatggcgtgcctcaattcgatgca
atattcccagctggatactatggtaaacacactgttctacttgtagacgagagtggcaaa
caaatcgcatggactgaagtaactgttgtagataatggtgtttcaaagcgtggtggatct
atgcttcaaacaggaagcaacattgtttatacttttgcgctgttcattatacttacattt
gttgcagctattgctcgttataaagttgcatttagatag
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