Gardnerella vaginalis HMP9231: HMPREF9231_0482
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Entry
HMPREF9231_0482 CDS
T01939
Name
(GenBank) phage/plasmid primase, P4 family domain protein
KO
K06919
putative DNA primase/helicase
Organism
gvh
Gardnerella vaginalis HMP9231
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
HMPREF9231_0482
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GFIT
Motif
Pfam:
D5_N
DUF5906
PriCT_1
Pox_D5
DUF4944
SMC_N
DUF4398
Motif
Other DBs
NCBI-ProteinID:
AEF32044
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Position
584208..586124
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AA seq
638 aa
AA seq
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MKDKHGKCARPRFHVYFPIEEVSDAKAYVELKTKIQSVFPYFDSNALDAARFLYGVKTPQ
VELYDGEKTITDFLSEEDFSEFDAGTEEIPSGQRNSRLSHIAGKLIKRYGATDETHEKFL
SEAERCNPPLPDAELSKIWYSAKKFGLKVASQEGYIPPSEYGKSYEEYKPDDLTDIAMAE
VFAKHNKNKAVYTMSAGWLYWTGKKWEASELKVMKLYMLIAKKVLKNAGIEFKTAYEEFV
QAESSGDKEQADKAKSEVNQAKQYLSFAKKMNDHSKVSGILKLAKSMLEVANEGLDRDAF
ILNTPCGIVDLKTGELKAHDPCSYCTKMTAVCPSRENMGLWQTTLDMVTAGDKEFQTFLQ
SHAGSTLIGQVFEESLLLVYGSGGNGKSTVFNAEAHVLGDYAGKIPAESLTTRAKNVKVD
LAELCGKRFILASETEEGQRLSISMLKQIASVDDISAERKYYAPFTFTPSHSTILYTNHL
PKVGSNDKGTWRRIFVAPFTKEIKNPKTDYVDELLQKAGGAILQWMIEGAKLYIQNSYKF
PTCKVVEQAKDAYRAENDWIGHFITDYCIKGVNETEMSRSLYLSYRQWANLNGEYVRNDR
DFSKALLLAGYSKKRTGKGYQWCGLSINPNLQAQEDFL
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacaagcatgggaagtgtgcaagaccacgttttcacgtgtattttccaattgaa
gaagtaagcgatgctaaagcttatgtggagcttaaaacaaagattcaatcagtattcccg
tattttgacagtaacgctcttgatgcggcacgttttctctacggtgttaaaactccacag
gtagaactttacgatggtgaaaaaacaatcactgatttcctctcggaagaagatttcagt
gaatttgatgcaggaacagaagaaataccatcagggcagagaaactctaggcttagtcat
atcgcaggaaaactcatcaaacgttatggtgctacagatgaaacacatgagaagtttttg
agtgaagcagaacggtgcaatcctcctttgcctgatgcagaattatctaaaatctggtat
tcggctaaaaagttcgggcttaaagtagcaagtcaagaaggttatattccgcctagcgag
tatggcaaaagctatgaggagtataagccggatgatttaacagatattgcgatggctgag
gtttttgccaaacataacaagaataaggctgtttatacgatgtctgccggctggctttac
tggacgggcaagaagtgggaagcgtctgagcttaaagttatgaaactttacatgcttatt
gctaaaaaggttttgaaaaatgctggtatcgagtttaagacagcttacgaagagttcgtt
caagccgaatcatcaggtgataaagagcaggcggataaagcaaagagtgaagtgaatcag
gcaaaacagtatctttcgtttgctaagaagatgaatgatcacagtaaagtgtccgggata
ttaaagcttgctaaatccatgctggaagttgcaaacgaaggactggatcgtgatgctttc
attctaaacacgccttgcggaatcgtggatttaaagactggagagctaaaagcacatgat
ccgtgttcgtactgtacgaaaatgaccgctgtttgcccttcacgggagaacatgggattg
tggcagacaacgcttgatatggttaccgcaggtgataaagagtttcagacatttcttcaa
agccatgcgggtagtacgcttataggtcaagtgtttgaagaatcgcttttgctggtgtac
gggtcaggtggcaacggtaagtcgaccgtgtttaacgcggaagcacatgtgcttggagat
tatgcggggaaaatacctgcggagtctttaaccactcgggctaaaaacgtgaaagtggat
ttagcggagctttgcggtaaaaggtttattcttgcctcggaaactgaggaagggcaaagg
ctttctatttccatgctgaaacagatagcaagcgtggatgatatttcagctgagaggaaa
tattatgctccttttacgtttacgccaagccactcaactattctctacacgaaccatctg
ccgaaagtcggttcgaacgataagggaacgtggcggagaatctttgtcgcaccgtttacg
aaagaaatcaagaatccgaaaacagactatgttgatgaacttttgcaaaaagcaggtggg
gcaatacttcaatggatgattgaaggagccaagctttatatccaaaacagttataaattc
cctacttgtaaggtggtagagcaggctaaggacgcttatcgggctgaaaacgactggata
ggccatttcatcactgattattgcattaagggcgtgaatgaaacggagatgagtaggagt
ctttacttgtcttaccgccagtgggcaaaccttaacggtgaatatgttagaaacgatagg
gatttttctaaggctttactgttagcgggttatagcaaaaaacggacgggtaagggctac
cagtggtgtgggctttccattaatccgaatttgcaggcacaggaggattttctttga
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