Gardnerella vaginalis HMP9231: HMPREF9231_0650
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Entry
HMPREF9231_0650 CDS
T01939
Name
(GenBank) cyclomaltodextrinase
KO
K01208
cyclomaltodextrinase / maltogenic alpha-amylase / neopullulanase [EC:
3.2.1.54
3.2.1.133
3.2.1.135
]
Organism
gvh
Gardnerella vaginalis HMP9231
Pathway
gvh00500
Starch and sucrose metabolism
gvh01100
Metabolic pathways
gvh01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
gvh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
HMPREF9231_0650
Enzymes [BR:
gvh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.54 cyclomaltodextrinase
HMPREF9231_0650
3.2.1.133 glucan 1,4-alpha-maltohydrolase
HMPREF9231_0650
3.2.1.135 neopullulanase
HMPREF9231_0650
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
Alpha-amylase_N
Malt_amylase_C
Glyco_hydro_31_2nd
Motif
Other DBs
NCBI-ProteinID:
AEF30994
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Position
771539..773302
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AA seq
587 aa
AA seq
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MINRQAILHRPLSQYAYSTAEYCLTIRLRAAKNNLCSCVLHYGNRVDLTPLDKFRTLKME
KIASDDYFDYYEANINSDLDRVCYYFEMQDADERLYLYADTIATDFPEDRTEVYQFPFIR
REEISDVPNWLKEAVVYNIFPDSFADSKRGISCEAKDYFDEKTGQTLHTRLGGTIRGIIE
NLDYIEDLGFNCLYLNPIFKAAEYHRYDLLDYYHVCPNLGTDDDFRELVSEVHNRGMHII
IDGVFNHSSWYFFAFDDVVKNGENSRYKDWFYGLKFPVKRPEDGKRPSYTCFAYERKMPK
LNTSNPEVRDYFMDVCRYWLEDFDVDGWRLDVANEVDKDFWRAFRAVAKKTKKDSVLIAE
IWENSERWLQGDMFDSTMNYEFRKVCRDFFAFGKINAREFNSRFVDMLLRYPFPIVQGQL
NLLDSHDVSRFRSLCTQSPSDAGDFSTVDKRFRLAELCLLTSVGAPSVFYGDELGVIGFE
ECDYRAPMPWENPVKDNRDLFRELIKLRKNNDCFIHGNFRVLDYDERGKFVFARETDSKR
VVVALNAFNESNDSFSALPDCKPIISYNYDAQNQSLGAFGYAIFEVK
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgataaatcgtcaagcaatattgcaccgaccactttcacaatatgcgtattctacggca
gaatattgtttaacaattcgcttgcgtgcagcaaagaataatctttgttcatgcgttttg
cattacggaaatcgcgttgatttgactccgttagataaattccgcacgttgaaaatggaa
aagattgcaagcgacgattactttgactactatgaagcaaacataaacagcgatttagat
agagtttgttattactttgagatgcaagatgcggatgagcgcttgtatttgtacgccgat
actattgcgactgattttccagaagatcgtacagaagtctaccagttcccatttattcgc
cgcgaggagattagcgacgttcctaattggcttaaagaggctgttgtttataacattttc
ccagatagttttgcagattctaaacgtggcataagttgcgaggcaaaagattattttgat
gaaaaaactggccaaactttacacactcgtttgggtggaacaattagaggaataatcgaa
aatcttgattatattgaggatttgggctttaattgcttgtatttaaatcctatttttaaa
gctgcagaataccatcgttacgatcttcttgactattaccatgtttgccctaatttagga
acggacgacgattttagggagcttgttagcgaggttcataatcgcggcatgcacataatt
attgacggcgtttttaatcattctagttggtatttcttcgcgtttgacgatgttgttaaa
aatggcgaaaattcgagatacaaggattggttctatggattaaagttccctgttaagcgc
cccgaagatggtaagcgcccaagctacacgtgttttgcgtatgagcgtaaaatgccaaag
ctcaatacttctaatcccgaagttcgcgactattttatggacgtttgccgctattggctt
gaagattttgatgttgacggttggcgtttggatgttgcgaatgaagttgataaagacttt
tggcgtgccttccgcgctgttgctaaaaagactaaaaaagatagtgtgctaattgcggaa
atttgggagaattctgagcgttggctgcaaggagacatgtttgactccactatgaactac
gaattccgcaaagtttgccgcgatttctttgcttttggcaagattaatgcacgcgagttt
aatagtcgatttgtagatatgcttttaagatacccattcccgattgttcaaggtcaattg
aatttgcttgatagccatgacgttagtcgctttagaagcttgtgtactcaaagcccttcg
gatgctggcgacttttctacggtagataagcgattccgcttggctgagctttgtttgctt
acatctgttggagctccaagcgtgttctatggtgatgagcttggtgtaattggttttgaa
gagtgtgattatcgagcgcctatgccttgggaaaatcctgtaaaagataatcgtgatttg
ttccgcgaacttataaaattgcgtaaaaataacgattgctttattcatggcaattttaga
gttcttgactatgatgagcgaggaaagtttgtgtttgcgcgagaaactgactctaagcgt
gttgtagtggctttaaatgcgtttaatgaatctaacgattcgtttagtgctttgcctgat
tgtaagccgattattagctacaattatgatgctcaaaatcaatctcttggagcttttgga
tacgcgatttttgaagtaaaatag
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