Galeopterus variegatus (Sunda flying lemur): 103594181
Help
Entry
103594181 CDS
T08727
Symbol
COL4A1
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
gvr
Galeopterus variegatus (Sunda flying lemur)
Pathway
gvr04151
PI3K-Akt signaling pathway
gvr04510
Focal adhesion
gvr04512
ECM-receptor interaction
gvr04820
Cytoskeleton in muscle cells
gvr04926
Relaxin signaling pathway
gvr04933
AGE-RAGE signaling pathway in diabetic complications
gvr04974
Protein digestion and absorption
gvr05146
Amoebiasis
gvr05165
Human papillomavirus infection
gvr05200
Pathways in cancer
gvr05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
gvr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
103594181 (COL4A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103594181 (COL4A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103594181 (COL4A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103594181 (COL4A1)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
103594181 (COL4A1)
09154 Digestive system
04974 Protein digestion and absorption
103594181 (COL4A1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
103594181 (COL4A1)
09162 Cancer: specific types
05222 Small cell lung cancer
103594181 (COL4A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
103594181 (COL4A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
103594181 (COL4A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
103594181 (COL4A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gvr04147
]
103594181 (COL4A1)
00536 Glycosaminoglycan binding proteins [BR:
gvr00536
]
103594181 (COL4A1)
Exosome [BR:
gvr04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
103594181 (COL4A1)
Glycosaminoglycan binding proteins [BR:
gvr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103594181 (COL4A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
103594181
NCBI-ProteinID:
XP_008575596
LinkDB
All DBs
Position
Unknown
AA seq
1668 aa
AA seq
DB search
MASLSLGGFQAEVAFTSDFRQWRPLGQGGCAGSGCGKCDCQGVKGQKGERGLPGLQGVIG
FPGMQGPEGPQGPPGQKGDAGEPGLPGTKGTRGPPGASGYPGNPGLPGIPGQDGPPGPPG
IPGCNGTKGERGPLGPPGLPGFTGNPGPPGIPGMKGDPGQILGHVPGTLLKGERGFPGIP
GMPGSPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGLSFQGPKGDKGDQGVSGPPG
VPGQAQIQEKGDYATKGEKGQKGEPGFQGMPGVGEKGEPGKPGPRGKPGKDGEKGEKGSP
GFPGDSGYPGLPGRQGPQGEKGEAGPPGPPGSVIGTGPLGEKGERGYPGTPGLRGEPGPK
GFAGRPGPPGPPGFPVPGQVGAPGFPGERGEKGDQGFPGVSLPGPSGRDGTPGPPGPPGP
PGQPGYTNGIVECQPGPPGNQGPPGIPGQPGLAGEVGEKGQKGEGCLVCDTAGLRGPPGP
QGPPGEIGFPGQPGAKGERGLPGRDGLEGVPGPQGAPGLMGQPGAKGEPGEIYFDLRLKG
DKGDPGFPGQPGTPGRAGTPGRDGHPGLPGPKGSPGSIGLKGERGPPGGVGFPGSRGDIG
PPGPPGFGPIGPAGDKGQAGFPGSPGSPGLPGPKGEAGKVVPLPGPPGAEGLPGTPGFPG
PQGDRGFPGTPGRPGLPGEKGTVGQPGIGFPGPPGPKGVDGLPGDVGPPGNPGRPGFNGL
PGSPGVQGQKGEPGVGLPGLKGLPGLPGIPGTPGEKGNIGGPGIPGEHGAIGPPGLQGVR
GDPGPPGLPGPIGSPGVPGIGPPGVRGPPGGQGPPGLSGPPGVKGEKGFPGFPGLDMPGP
KGDKGTQGLPGLTGQSGLPGLPGQQGSPGIPGFPGPKGEMGVMGTPGQPGLPGPVGTPGL
PGEKGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDKVDMGSMKGQKGDQGEKGQIGP
AGEKGSRGDPGTPGMPGKDGQAGHPGQPGPKGDPGISGTPGSPGLPGPKGSVGGMGLPGT
PGEKGVPGIPGLQGVPGLPGEKGAKGEKGQAGLPGIGIPGRPGDKGDQGIPGFPGGPGEK
GEKGSTGIPGIPGSPGPKGSPGSVGYPGSPGLPGEKGDKGLPGLDGVPGIKGEAGLPGRP
GATGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGTKGDKGSKGDVGFPGLAGSPG
IPGSKGEQGFMGPPGPQGQPGLPGAPGQPVQGPKGDRGPQGQPGLPGLPGPMGPPGLPGL
DGLKGDKGNPGWPGTPGAPGPKGDVGFQGMPGIGGSPGIAGPKGDLGPPGVPGFQGQKGL
PGLQGIKGDQGDQGIPGPKGLPGPPGPPGPYDIMKGEPGLPGPQGPPGLKGLPGPQGPKG
QQGVTGSVGLPGPPGSPGFDGAPGQKGETGPFGPPGPRGFPGPPGPDGLPGSMGPPGTPS
VDHGFLVTRHSQTIDDPQCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTMP
FLFCNINSVCNFASRNDYSYWLSTPEPMPMSMAPVTGDSIRPFISRCAVCEAPAMVMAVH
SQTIQIPQCPSGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRGT
CNYYANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVCMRRT
NT seq
5007 nt
NT seq
+upstream
nt +downstream
nt
atggcttccttgtcccttggaggcttccaggcagaggtggccttcacgagtgacttccgc
cagtggaggccattgggtcagggtggatgtgctggctctggctgtggaaaatgtgactgc
caaggagtgaagggacaaaagggggaaagaggcctccccgggttgcaaggtgtcattggg
tttcctggaatgcaaggacctgaggggccccagggaccaccaggacaaaagggtgacgct
ggagaaccaggactccccggaacaaaagggacgagaggacccccaggagcatccggttac
cctggaaaccccggacttcctggaattcctggccaagatggcccaccaggtcccccaggt
atcccgggatgcaacggtacaaagggagagagagggccactggggccgcctggtttgcct
ggattcactggaaatcccggaccgccggggataccaggaatgaagggggacccaggtcaa
atactgggccatgtgcctgggacactgttgaaaggcgaaagagggtttcctggaatccca
gggatgccaggctcaccaggattaccagggctgcaaggtcccgttggccctccaggattt
actggaccaccaggtcccccaggccctcctggccctccaggtgaaaaggggcaaatgggc
ttaagttttcaaggaccgaaaggggacaagggtgaccaaggagtcagtgggcctccagga
gtaccaggacaagctcaaattcaagaaaaaggagactatgccaccaagggagaaaagggt
caaaaaggtgaacctggatttcagggaatgccaggggtcggagagaaaggtgaaccggga
aagccgggtccccggggaaaacctggaaaagatggtgaaaaaggagaaaaagggagtcca
ggttttcctggtgactcaggatacccggggctcccaggccgtcagggccctcagggtgaa
aaaggagaagcaggtcctccgggcccacctggaagtgttataggcacaggccctttggga
gagaaaggagaacggggctacccaggaactccagggttaagaggagagccgggcccaaaa
ggtttcgcaggaagaccaggcccaccaggccctccaggcttccctgtaccggggcaggtt
ggtgctcccggcttccctggtgaaagaggagaaaaaggcgaccaaggatttccaggagtt
tccttgccaggaccaagtggaagggatgggaccccaggccctcctggaccccctgggccc
cctgggcagccgggctacacaaatggaattgtggaatgtcagccaggaccaccaggtaat
cagggtcctcctggaattccagggcagccaggattggcaggcgaagttggagagaaaggt
cagaaaggagagggttgcctagtctgtgatacagcaggacttcgtgggcctcccgggcca
cagggccccccaggagaaatcggtttcccgggacagccaggggccaagggcgagagaggt
ttacccggcagggacggtcttgaaggcgtgcctgggccgcaaggtgcaccagggctgatg
ggccagccaggagccaagggggagcctggggagatttattttgacctgcgactcaaaggt
gacaagggagacccaggtttcccaggacagcctgggacgccagggagagcaggaacgcct
ggaagagatggacatccgggtcttcccggccccaaaggctccccgggttcaataggattg
aaaggagaacggggacctcctggaggagtgggattccccggcagtcgtggtgacatcggt
ccccctggccctcccggatttggtccgattggccctgctggtgacaaaggacaagcaggc
tttcctggaagccctgggtccccaggcttgccaggtcccaagggtgaagcaggaaaagtc
gttcctttacccggtccccctggagcagaaggacttccagggaccccaggcttcccagga
cctcaaggtgaccgaggctttcctggaaccccaggaaggccaggcctcccaggagagaag
ggtactgttggccagccgggaatcggctttccagggcctcctggccccaaaggtgttgat
ggcttgcctggtgatgtgggacccccagggaatccaggtcgcccaggatttaatggctta
cctggcagcccaggtgtgcagggccaaaagggagagcctggagttggtctaccaggcctg
aaagggttgccaggtcttcctggcattcctggaacacccggggagaaggggaacatcggg
ggaccaggcattcctggagaacatggagccatcggccccccggggcttcagggagtcaga
ggtgacccgggacctcctggattgccagggcccataggatctccaggagttccaggaata
gggccccctggagttaggggccctcctggaggacagggaccaccaggcttatcaggccct
cccggagtaaagggagagaaaggcttccctggattcccaggtctggacatgccaggcccc
aaaggagacaaagggacccaaggactccccggcctcactgggcagtcggggctcccgggc
cttcctggacagcagggatcgcccggaatccccgggtttccaggtcccaagggagagatg
ggcgtcatggggacccctgggcagccgggcttgcctggacccgtggggactccaggatta
ccgggtgaaaaaggggaccacggcttcccgggctcctcaggacccaggggagaccctggc
ttcaagggtgataagggggatgtcggtctccctggcaaacctgggtccatggataaagtg
gacatgggcagcatgaagggacagaagggagaccaaggagagaaaggacagattgggcca
gctggtgaaaaaggatcccgaggagaccctgggaccccaggaatgcctggaaaggatggg
caagccgggcatcctggacagccagggcctaaaggtgatccaggcataagtggaacccca
ggttctcctgggcttcctggaccaaaaggatcagttggtgggatgggcttgccaggaaca
cctggagagaaaggtgtgcctggcatccccggcctgcagggggtccccggcttgcctgga
gagaaaggagcaaaaggagagaaggggcaggcgggtctccctggcatcgggattcctggg
cggcctggagacaagggagatcaggggattccgggtttcccaggaggccctggagagaag
ggagaaaaaggaagcacaggcattccgggaataccgggctctccgggccctaaaggatct
ccggggagtgtcggctatccaggaagccctgggttgcctggagaaaaaggtgacaagggc
ctaccgggattggacggcgtccccggcatcaaaggagaagcaggtcttccggggaggcct
ggcgccacaggcccagccggccagaaaggggagcctggcagtgatggaatcccagggtcg
gcgggagagaagggggaaccaggtctaccaggaagaggattcccagggtttccaggaacc
aaaggagacaaaggttcaaagggtgacgtgggcttcccagggttagccgggagtccagga
atccccggatccaaaggagagcaaggattcatgggtcctccggggccccaaggacagccg
ggacttcccggggcaccaggccagcctgtgcaggggcccaaaggagaccgggggcctcag
ggacagccaggcctgccagggcttccgggacccatggggcctcctgggctccctgggctt
gatggactgaaaggggacaaaggaaatccgggctggccaggaacgcctggggctccaggg
cccaagggagatgtcggattccagggcatgcctgggattggtggctccccaggaattgca
ggtcctaagggtgatttgggccctccaggggttccaggatttcaaggtcagaaagggctt
cctggcctccagggaattaaaggcgatcaaggagatcaaggcatccctggacctaaaggg
ctcccgggtccccccggccctccaggtccttacgatatcatgaaaggggagccagggctc
cctggtcctcagggtcctccaggactgaaagggctaccgggacctcagggccccaaagga
cagcaaggtgtgacaggatcggtgggcttacctggacctccaggtagtcccgggtttgat
ggtgcccctggccagaaaggagagacgggaccttttgggcctcctggtccaagaggattt
cctggcccaccaggccctgatgggcttccaggatccatgggcccccccggcaccccatct
gttgatcatggcttcctcgtgaccaggcacagtcagacaatcgatgacccacagtgtcct
cctgggaccaagattctttaccatgggtattctttgctctacgtgcaaggcaatgaacgg
gcccatggccaggacttgggcacggccgggagctgcctgcgcaagttcagcaccatgccc
ttcctgttctgcaacatcaacagcgtgtgcaacttcgcctcccgcaacgactactcctac
tggctgtccacccccgagcccatgccaatgtccatggcacctgtcaccggggacagcatc
agacccttcattagcaggtgcgcggtgtgcgaggctcctgccatggtgatggccgtgcac
agccagaccattcagatcccgcagtgccccagcgggtggtcgtcgctgtggatcggctat
tcctttgtgatgcacacgagcgctggtgccgaaggttctggccaagccctggcgtccccc
gggtcctgtctggaggagtttagaagcgcaccattcatcgagtgccatggccgtgggact
tgcaactactatgcaaacgcttacagcttttggcttgccactatagagagaagcgagatg
ttcaagaagcccacgccgtccaccttgaaggcaggggagctgcgcacgcacgtcagccgc
tgccaagtgtgtatgagaaggacataa
DBGET
integrated database retrieval system
