Paenibacillus sp. Y412MC10: GYMC10_4662
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Entry
GYMC10_4662 CDS
T01100
Name
(GenBank) D-alanine/D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
gym
Paenibacillus sp. Y412MC10
Pathway
gym00470
D-Amino acid metabolism
gym00550
Peptidoglycan biosynthesis
gym01100
Metabolic pathways
gym01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
gym00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GYMC10_4662
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GYMC10_4662
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
GYMC10_4662
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
gym01011
]
GYMC10_4662
Enzymes [BR:
gym01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
GYMC10_4662
Peptidoglycan biosynthesis and degradation proteins [BR:
gym01011
]
Precursor biosynthesis
Amino acid ligase
GYMC10_4662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
RimK
CPSase_L_D2
ATP-grasp
GARS_A
ATP-grasp_4
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
ACX66882
UniProt:
D3EAB7
LinkDB
All DBs
Position
complement(5259507..5260424)
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AA seq
305 aa
AA seq
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MKVGVIMGGVSSEREVSLMTGKEMIAHLDKSRYEVYPIEIHDKRELISKTEGIDIALLAL
HGAFGEDGTVQGTLDTLGIPYTGSGVLASSLCMDKDLSKKLLRYEGLHTADWIMVSCMEE
LAAADVEGLGFPVVVKPNAGGSSIGTRIVRDSAGLASAVEEALRWDRFVMIEQWIEGEEI
TCPVLNGDMLPIVSIKPNSEFFDYASKYEEGEADEQVIELPTELQEQVRTAALQCYKAMK
CSVYARIDIILKGKIPYILEVNTLPGLTKTSLLPRSAEAAGYSFSGLLDALIETSLSERK
REGKE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttggcgtcatcatgggaggcgtatcatccgagagggaagtttcgctcatgacc
ggcaaagagatgatcgctcatttggataaaagccgctacgaggtctatccgatcgagatt
cacgataaacgcgagctgatcagcaaaaccgaaggcatcgatattgcgctgctcgccctg
cacggcgcgttcggggaagacggcacggtgcagggcaccctcgatacgctggggattccg
tataccggcagcggcgttctggccagcagtctctgcatggataaagatttgagcaagaag
ctgctgcgttacgaaggattgcatacggctgactggatcatggtcagctgcatggaagag
ctggcggccgccgacgtggaggggctcggttttcccgttgtggtgaagccgaatgcgggc
ggttccagcatcggtacccggatcgtgcgcgactcggctggcctagcatccgccgtcgaa
gaggcgctgcggtgggaccgcttcgtcatgatcgagcaatggatcgagggagaggaaatc
acctgcccggtccttaacggcgatatgcttccgattgtgtcgatcaagccgaactccgaa
ttcttcgattatgcatccaaatacgaagaaggcgaagcggatgagcaggtgatcgagctt
cccacagaacttcaggagcaggtgcgcacagccgcgcttcaatgctataaggcgatgaag
tgcagtgtatatgcccggatagatatcatcctgaagggaaagattccttatattttggag
gtcaacacgcttccgggtttaacgaagaccagtctgctgccaagaagcgcggaagcggcg
ggatattcgttcagcggacttttggatgccttgattgaaacctcattatcggaacgaaaa
cgcgaaggcaaggagtag
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