Halotalea alkalilenta: A5892_11290
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Entry
A5892_11290 CDS
T04333
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
haa
Halotalea alkalilenta
Pathway
haa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
haa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A5892_11290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
haa03019
]
A5892_11290
Enzymes [BR:
haa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A5892_11290
Messenger RNA biogenesis [BR:
haa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A5892_11290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
ERCC3_RAD25_C
Hydrolase
AAA_19
AAA_22
Rrn6_K-rich
Motif
Other DBs
NCBI-ProteinID:
ANF57970
UniProt:
A0A172YFC0
LinkDB
All DBs
Position
2532349..2533725
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AA seq
458 aa
AA seq
DB search
MSESEKTSPPTQSDNHKPKRRRRKPRQNAAGEARRQQRERAPRAAVSQDSETPAAPPAPP
VSAAPAVLASVPPRAGQWRFQDFDLPTPLMRAINDLSFQYCTPIQGEALKHTLLGGDVVG
KAQTGTGKTAAFLISIFTYFLEEERPDGQKPGAPRALIVAPTRELALQIEKDARQLARYT
DLEVVSAVGGMEYQKQQQQLKKTLDVLIATPGRLLDFHQKRDVDLSQVEVLVLDEADRML
SMGFIPDVKRIIRSTPKKEERQTFLFSATFTQDILNLASQWTFDAAYVEIASESQTATNV
EQRVYMVSDRDKVRLLTNLLKQDELDRVMVFANQKYVVRELDETLRKAGINVAMLSGDVP
QRQRIRTLEEFREGKVAVLVATDVAGRGIHISDVSHVINYTLPEDPEDYVHRIGRTGRAG
AKGTSISFVGEEDAFALPEIESFIKDKLPCEHPPEGLL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagtcggaaaagacctcaccgccgacccagagcgacaatcacaagcccaagcgc
cgccgtcgcaagccccgccagaacgcagcgggagaagcccgtcgccagcagcgcgagcgg
gcaccgcgagctgctgtttcgcaggatagcgagacgccggccgcgccgccggcgccgcca
gtgagtgcagcccccgctgtccttgcctcggttccgccgcgggcggggcagtggcgattc
caggatttcgatctgcccaccccgctgatgcgggcgatcaacgatctcagcttccagtac
tgcaccccgatccagggggaagcgctcaagcacaccctgctcggtggcgacgtggtcggc
aaggcgcagaccggtaccggcaagactgcggcgtttctgatctcgatcttcacctatttc
ctcgaagaggagcgtccggacggccagaagcccggcgcgccgcgcgcgctgatcgtcgcc
ccgacccgggaactggcgctgcagatcgagaaggatgctcgccagcttgcccgctacacc
gaccttgaagtggtcagcgcggtcggcggcatggagtaccagaagcagcagcagcagttg
aagaagaccctcgacgtgctgatcgccacgcccggacggctgctcgacttccaccagaag
cgtgacgtcgatctttcccaggtcgaggtgctggtgctcgacgaggccgaccggatgctg
tcgatgggcttcattcccgacgtcaagcggatcatccgctcgacgccgaagaaggaagag
cgccagaccttcctgttctcggcgaccttcacccaggacatcctcaatctggccagccag
tggaccttcgatgccgcctacgtcgagatcgcgtccgagagccagaccgcgaccaacgtc
gagcagcgggtctacatggtcagcgaccgcgacaaggtgaggctcttgaccaacctgctc
aagcaggacgagctcgaccgggtgatggtgttcgccaaccagaagtacgtggtccgtgag
ctcgacgagaccctgcgcaaggccggcatcaacgtggccatgctttccggcgacgtgccg
cagaggcagcgcattcgcaccctcgaggagttccgcgagggcaaggtggcggtgctggtg
gcgaccgatgtcgccggacgcgggatccacatctccgatgtctcccatgtgatcaactac
accttgcccgaggatcccgaggactacgtccatcggatcggacgcaccgggcgcgctggc
gcgaagggcacatcgatcagtttcgtcggcgaggaggatgccttcgcgctgccggagatc
gagtcgttcatcaaggacaaactgccttgcgagcatccgcccgaggggctgctctga
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