Haloarcula sp. CBA1115: SG26_04005
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Entry
SG26_04005 CDS
T03645
Name
(GenBank) pseudouridine synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hab
Haloarcula sp. CBA1115
Brite
KEGG Orthology (KO) [BR:
hab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hab03016
]
SG26_04005
Enzymes [BR:
hab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
SG26_04005
Transfer RNA biogenesis [BR:
hab03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SG26_04005
Prokaryotic type
SG26_04005
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AJF24933
UniProt:
A0A0B5GTP3
LinkDB
All DBs
Position
complement(819904..821286)
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AA seq
460 aa
AA seq
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MQAAHPIERAVGMEYYVSDADGVGGHLRASPADFRVRELEAFGTEPVDADTGAYPHLVFR
AELRNWETNDFASKLSDRLGISRERVSWAGTKDKRAVTTQLFSVKGVAAEDLPEIGGTDI
EVIGRAGRPILFGDLAGNAFEIVVRDTENTDNAASVVADLQAFASGEDPTGDRARSSDAT
LPDGDTTVGVPNYFGQQRFGSRRPVTHEVGLAIARGEWKNAVLAYVGNPDEREPESTQEA
RAYVDETHDWAGALDRLPGALGYERSICHRLVENGASEPADFREALEVLPSNLQSLFVNA
AQSYVFNRILSERLDRGLPFDRPVEGDIVCFRDSDAPEAFPIPDADRTQEVTAKRLSTVE
RHCERGRAFVTAPLVGTDTELGSGEPGDIAREVLDDVGLEQGDFDLPGAFDSDGTRRAIL
LRTDLGVERDDADLTFSFSLPKGSYATVLLREFRKGDPNA
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcggcccacccaatcgagcgagcggtcggtatggagtactacgtcagcgacgcc
gacggggtgggcggccacctccgcgcttcccctgcggacttccgggttcgggaactggag
gcgttcggcaccgaaccggtcgacgccgacaccggggcgtatccgcatctcgttttccgg
gcggagcttcgtaactgggagaccaacgactttgccagcaaactctccgacaggctgggt
atctcccgcgagcgggtgtcgtgggcgggaacgaaagacaagcgcgcggtcacgacccag
ttgttctcggtaaagggagtcgcagccgaggacctgccggagatcggcggcacggacatc
gaggttatcggccgcgccggccgccccatcctcttcggcgatctggcgggcaatgccttc
gagattgtcgtccgggacaccgagaacaccgacaacgccgccagcgtggtggccgacctg
caggcgttcgccagcggagaggacccgacgggggacagggcccggtccagcgacgccacg
ctgccagacggcgacacgacggtcggcgtccccaactacttcggccagcagcggttcggg
tctcgccggccggtcacccacgaggtcgggctggccatcgcccgcggcgagtggaagaac
gcagtcctcgcctacgtcggaaacccggacgagcgcgaaccggagtcgacgcaggaggcg
cgagcatacgtcgacgaaacccacgactgggccggcgcgctggacaggctgcccggcgcg
ctgggctacgagcgctccatctgtcaccggctggtcgagaacggagccagcgagccggcg
gacttccgcgaggcgctggaggtgctgccgtcgaacctccagtcgctgttcgtcaacgcc
gcccagtcctacgtcttcaaccgcatcctttccgagcggctggaccgcgggctccccttc
gaccggcccgtggaaggcgacatagtctgtttccgtgacagcgacgcacccgaggccttc
ccgattccggacgccgaccgcacccaggaagtcactgccaagcggctgtcgaccgttgag
cgccactgcgagcgcgggagagcgtttgtcaccgcgccgctggtcgggaccgatactgag
ctgggcagtggcgaaccgggcgacatcgcccgtgaagtcctcgacgacgtcggcctcgaa
cagggcgacttcgacctccccggcgcgttcgacagcgacgggacgcggcgggccatcctg
ctccgaacggacctcggtgtcgagcgcgacgacgccgacctgacgttctcgttctcgctg
ccaaaggggagctacgcgacggtcctcctccgggagttccggaaaggcgacccgaacgcg
tag
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