KEGG   Haloarcula sp. CBA1115: SG26_13660
Entry
SG26_13660        CDS       T03645                                 
Name
(GenBank) DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
hab  Haloarcula sp. CBA1115
Pathway
hab03030  DNA replication
hab03410  Base excision repair
hab03420  Nucleotide excision repair
hab03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:hab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    SG26_13660
   03410 Base excision repair
    SG26_13660
   03420 Nucleotide excision repair
    SG26_13660
   03430 Mismatch repair
    SG26_13660
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hab03032]
    SG26_13660
   03400 DNA repair and recombination proteins [BR:hab03400]
    SG26_13660
Enzymes [BR:hab01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     SG26_13660
    6.5.1.6  DNA ligase (ATP or NAD+)
     SG26_13660
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     SG26_13660
DNA replication proteins [BR:hab03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    SG26_13660
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     SG26_13660
DNA repair and recombination proteins [BR:hab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     SG26_13660
   NER (nucleotide excision repair)
    Other NER factors
     SG26_13660
   MMR (mismatch excision repair)
    Other MMR factors
     SG26_13660
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-ProteinID: AJF26706
UniProt: A0A0B5GQ67
LinkDB
Position
2712231..2713895
AA seq 554 aa
MEFAAFADRAEAIEAESADTAITEAVTDLFTDAGSDLPTLARFVQGRVFPAYESRTLDIG
PRLCYEAIARAAGQNVGADDVEQRLADMGEIGAVAASYDLGGQQGLAAFGAGGSGSDALT
VTELDDELRNLAAVDGSGSQGTKVDILFGLFSRCSSTEAGYLARLVLSEMRIGVGEGTVR
DAAAAAFDVPVEAVERAVQVSNDYGMVAEVARDEGESGLATVTLEIGRPVQAMLAQAGTV
AGALEDWDRAAVEWKYDGARVQVHFDGEDARLFSRNMEEVTDPLPEVVDTVESTLDAPAI
LDGEVVAVDADGDPLPFQEVLRRFRRKHDVAAAREDVAVRLHAFDCLHADGEDLLDASLK
TRHDRLESLLPAGSDVVSRMWLSDDAEEIENLEAEALAAGQEGIMLKDPTAAYSPGKRGK
HWRKRKPDVETLDCVVTGAEWGEGRRANVLGSFELSVRTDDGYATVGNVATGITDEELDD
LTERFEPHIRREDGRDVTLDPAIVFEVGYEEIQASQSYASGYALRFPRFLSVREDKTPDD
ADPLERVERLAASQ
NT seq 1665 nt   +upstreamnt  +downstreamnt
atggagttcgccgccttcgccgaccgggccgaagcaatcgaagccgagagcgccgatacc
gcgataaccgaggcggtaaccgacctgttcactgacgcagggtcggacctcccgacgctc
gctcgcttcgttcagggccgggtgtttccggcctacgagtcccgcacgctcgacatcggc
ccgcggctctgctacgaggcgattgcccgggcggccggccagaacgtcggcgctgacgac
gtagagcagcgcctcgctgacatgggcgaaataggggctgttgcggccagctacgacctc
ggcggccagcagggactcgccgcattcggagcaggcgggagcgggagcgacgcactgacc
gtcacagaactcgacgacgagctacggaacctggcggctgtcgacggcagtgggagccaa
gggacgaaagtcgatatcctctttggcctgttctcgcggtgttcgtcgacggaagccggc
tacctcgcccgcctcgtcctctcagagatgcgtatcggcgtcggcgaggggacggtccgg
gacgccgccgcggccgctttcgacgtgccggtcgaggccgtcgaacgggccgtgcaggtg
tcgaacgactacggtatggttgccgaagtggcccgcgacgaaggggagtccggactggcg
accgtcaccctcgaaatcggtcgccccgttcaggcgatgctggcacaggcgggcacggtc
gctggcgcgctcgaagactgggaccgcgccgcggtcgagtggaagtacgacggcgctcgc
gtgcaggtccacttcgacggcgaggacgcccggctgttctcccggaacatggaggaagtc
acggacccgcttcccgaggtcgtcgacactgtcgagtcgacactcgacgcaccggcaatt
ctcgacggcgaggtggtcgcagtcgacgccgacggcgacccgctcccgtttcaggaggtg
ctgcggcgcttccgccggaaacacgacgttgccgcggcccgcgaggacgtggccgtccgc
ctgcacgccttcgactgcctgcacgccgacggcgaggacctgctcgatgcctcgctgaag
acgcgccatgaccgcctcgaatcactcttgcctgccgggagtgacgttgtctcgcggatg
tggctgtccgacgacgccgaggaaattgaaaatctggaggctgaggccctcgccgctggg
caggagggaatcatgctgaaagacccgaccgcagcctactcgcccggcaagcggggcaag
cactggcgcaagcgcaaacctgacgtggagacgctcgactgtgtcgtcaccggcgcggaa
tggggcgaaggccgccgggcgaacgtgcttggctcgttcgagctttctgtccgaaccgac
gacggctacgctaccgtcggcaacgtggcgacgggcattaccgacgaggaactggacgac
ctgacggagcgcttcgaaccgcacatccggcgagaggacggccgcgacgtaacccttgac
ccggcgattgtcttcgaggtcggctacgaggagatccaggcctcccagtcctacgcctcg
ggctacgcgctccggttcccccggtttctctcggttcgtgaggacaagaccccggacgac
gccgacccgctggagcgcgttgagcggctggcggcgtcacagtag

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