Haliovirga abyssi: HLVA_12630
Help
Entry
HLVA_12630 CDS
T09313
Symbol
trpB
Name
(GenBank) tryptophan synthase beta chain
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
haby
Haliovirga abyssi
Pathway
haby00260
Glycine, serine and threonine metabolism
haby00400
Phenylalanine, tyrosine and tryptophan biosynthesis
haby01100
Metabolic pathways
haby01110
Biosynthesis of secondary metabolites
haby01230
Biosynthesis of amino acids
Module
haby_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
haby00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HLVA_12630 (trpB)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
HLVA_12630 (trpB)
Enzymes [BR:
haby01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
HLVA_12630 (trpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
BDU50694
LinkDB
All DBs
Position
complement(1444904..1446085)
Genome browser
AA seq
393 aa
AA seq
DB search
MKKETGHFGIFGGQYVPETLMPALEELEENYNKYKNDKDFLDELNYYLKEYVGRETPLTF
AANVSKELGAKIYLKREDLNHTGAHKINNTIGQILLAKRMGKKRIIAETGAGQHGVATAT
VAALFGLECEIFMGEEDIKRQSLNVFKMKLLGAKVNPVKSGTATLKDAMNEAIRDWVTNV
ENTFYIIGTAAGPHPYPIMVRDFQSVIGKEAKRQIMEKEGRLPDYLIACIGGGSNAMGLF
YPFVEDKSVKLIGVEAAGFGLNSGMHAASITGGKVGILHGNRTYLLQDENGQILDTHSIS
AGLDYPGVGPEHSYFHSIGRGTYVSVTDDEALEGFKFLTEKEGIIPALESSHALGYLLKL
KGKLKEDDIVILNVSGRGDKDMNTVAKVLGVEL
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaagaaacaggacattttggaatttttggtggacagtacgttccggaaacactt
atgccagcattagaagaactagaagaaaattataataaatataagaatgataaagatttt
ttggacgaattaaattattatttaaaagaatatgttggaagagaaactcctcttacattt
gctgcaaatgtaagtaaggaattaggagctaaaatatatttaaaaagagaagacctaaat
catactggagctcacaaaataaataatacaataggacaaattttacttgctaaaagaatg
gggaaaaagagaattatagctgaaacaggagcaggacaacatggagtagctacagctaca
gttgcagcactttttggattagaatgtgaaatattcatgggagaagaggatataaaaagg
caatctctaaatgtatttaaaatgaaacttttaggtgcaaaagttaatccagtaaaatca
ggaacagcaacgttaaaagatgctatgaatgaagccataagagattgggttacaaatgta
gaaaatactttttatataataggaacagcagcaggaccacatccatatccaattatggta
agagatttccaatcagttataggaaaagaagctaaaagacaaattatggaaaaagaagga
agattacctgattatttaattgcttgtattggtggtggaagtaatgcgatggggctattt
tatccatttgtagaagataaaagtgttaaattaataggagtagaagcagctggatttggt
cttaattctggaatgcatgcagcatcaattacaggtgggaaagttggaattctacatgga
aataggacttatttattacaggatgaaaatggacagatattagatactcattctatttca
gctggactagattatccaggagtagggccagaacatagttattttcatagtataggaaga
gggacatatgtctctgtaactgatgatgaagcgttagaagggtttaaatttttaactgaa
aaagagggaataataccagctttggaaagttcgcatgctcttggatatttattgaaatta
aaaggaaaattaaaggaagatgatatagtaatattaaatgtatcaggacgtggtgacaaa
gatatgaatacagttgcaaaagttttgggggtggaattataa
DBGET
integrated database retrieval system