Halomonas sp. SF2003: C8233_00985
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Entry
C8233_00985 CDS
T05423
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
haf
Halomonas sp. SF2003
Pathway
haf02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C8233_00985
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
haf02000
]
C8233_00985
Transporters [BR:
haf02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
C8233_00985
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
RsgA_GTPase
nSTAND1
AAA
AAA_16
AAA_29
AAA_22
TOBE_2
AAA_25
AAA_28
NACHT
AAA_18
ATPase_2
AAA_23
nSTAND3
Rad17
AAA_5
NB-ARC
TsaE
AAA_14
Motif
Other DBs
NCBI-ProteinID:
AVV32443
LinkDB
All DBs
Position
complement(248553..249740)
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AA seq
395 aa
AA seq
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MLAIDTATTFDSQSAGGLLTSALRERAADQHYLKLNGLAKSFGKTQVFAEIDAEIARGEF
ITLLGPSGCGKSTLLRAIAGLNDVDAGQIIVDGHDITPLPPQRRGIGMVFQHYALFPNMR
VADNVAFGLRMKKVRPEERERRVSEVLRLVELTDQAQRFPHQLSGGQRQRVALARALVVE
PQILLLDEPLSALDARIRRHLRDQIRDIQKSLGLTTLFVTHDQEEALLLSDRIFLMHQGR
ILQQGNAESLYTRPVDATAAGFMGHYNLIGREVARPLLGYESDSPRVALRPEALYLQPDT
SPQGQQDEYANFPTQPLPDNAGPGCPGVIRRHQLLGNIVRYEVDCQGLRLNVDVLNRSAR
QLLPRHLRVVLHADLDEVQALGGNETAATSQVSHG
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgcttgccatcgacaccgccaccacattcgatagccagagcgccggcggccttctgacc
agcgccctgcgcgaacgcgccgccgaccagcactacctcaagctcaatggcctggccaag
agcttcggcaagacccaggtattcgccgagatagatgccgagatcgcgcgcggggaattc
atcaccctgctcggcccctccggctgcggcaagtcgaccctgctgcgcgccattgctggg
ctcaatgatgtcgatgccggccagatcatcgtcgatggtcacgacatcacgccactgccg
ccgcagcgtcgcggcatcggcatggtcttccagcactatgcgctgttccccaacatgcgc
gtggcggacaacgtggccttcgggctacgcatgaagaaggtgcgcccggaagaacgcgag
cggcgtgtcagcgaggtgctcagactggtggagctgaccgatcaggcgcagcgcttcccg
catcaactgtccggcggccagcgtcagcgcgtggcactggcacgcgcgctggtggtcgag
ccgcagatcctgctgctggatgagccgctgtcggcactcgatgcacgtatccgtcgccat
ctgcgtgatcagatccgcgacattcagaagagcctcggcctgaccaccctgttcgtgacc
cacgatcaggaggaggcgctgctgctgtcggaccgcatcttcctgatgcatcaggggcgc
atcctgcaacagggcaatgccgagtcgctgtatacccgcccggtggatgccacggcggca
ggcttcatggggcattacaacctgatcggtcgcgaggtggcgcgcccgctgctcggctac
gaaagcgacagcccgcgcgtggcactgcgcccggaagcgctgtatctgcaaccggatacc
agcccccagggacagcaggatgaatatgccaacttcccgacccagcccttgccggacaat
gccggccccggctgcccgggcgtgatccgccgccaccagctgctcggcaatatcgtgcgc
tacgaggtggattgtcaggggctgcgcctgaatgtcgatgtcctcaatcgcagcgctcgg
cagttattgccgcgccatctgcgcgtggtgctgcacgccgatctggatgaagttcaggcg
ctgggcggtaacgagaccgccgccacgtcgcaggtgtcccatggatga
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