Halomonas sp. SF2003: C8233_06700
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Entry
C8233_06700 CDS
T05423
Symbol
msbA
Name
(GenBank) lipid A export permease/ATP-binding protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
haf
Halomonas sp. SF2003
Pathway
haf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C8233_06700 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
haf02000
]
C8233_06700 (msbA)
Enzymes [BR:
haf01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
C8233_06700 (msbA)
Transporters [BR:
haf02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
C8233_06700 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_22
DUF3584
DUF87
AAA_30
AAA_33
MMR_HSR1
RsgA_GTPase
AAA_21
RestrictionSfiI
AAA_24
nSTAND3
nSTAND1
NB-ARC
AAA_23
Motif
Other DBs
NCBI-ProteinID:
AVV33411
LinkDB
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Position
complement(1649430..1651217)
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AA seq
595 aa
AA seq
DB search
MPHEGAAQVYGDPVSRDSTWIHYRRLLGYVRPYWKMFLAAVVGYIIYGASSTALAEMMKR
LIDGIQNPDAQFRLFLPLFVIGMFAVRGVGTFLGTYCMSDVARNVVHTLRTTVFNHMLHL
PGRYFDENSTGHLITRVTYHVEQITGAATKALTIILREGFFVLGLLGYLFWTNWKLTLVF
IAVTPLIGWVVSYASKRFRKLSKRIQGSMGEVTHVASEALSGHRVVRTHGAEDYEKARFA
AVSEYNREQKMKEALTKATATPVIQLLIAVALATLVWLAMAPELMAGMSAGEFVGFITAA
SMMAKPVRQLTEVNGEIQKGMAASEELFGLLDTPAEPDNGTLVPEGRLEGRVRFDNVHFR
YADHQPEVLKGIDLEVKPGQMVAIVGRSGSGKSTLMSLLPRFYAPTTGRILIDDVAIEDY
KLRPMRQQIALVSQNVTLFNADLTANIAYGTGEVDKARVEEAARAAYAHEFIERMSEGYD
TIVGDNGVMLSGGQRQRIAIARAIYKDSPILVLDEATSALDTESERYIQRALEEVCQGRT
TFVIAHRLSTIEKADRILVMDDGEIIEDGTHESLIAQEGAYAALHRIQFRETADA
NT seq
1788 nt
NT seq
+upstream
nt +downstream
nt
atgccccatgagggcgccgcccaagtctatggagaccccgtgagtcgcgactccacctgg
attcattaccgccgcttgctcggctatgttcgcccgtactggaagatgtttctggccgcc
gtcgtcggctacatcatctacggtgcctcgagtacggcgctggccgagatgatgaagcgc
ctgatcgacggcattcagaatcctgacgcccagttcagactgttcctgccgctgttcgtg
atcggcatgttcgccgtgcgcggcgtcggcaccttcctgggcacctactgcatgagtgat
gtggcgcgcaacgtggtccacaccctgcgcaccacggtgttcaaccacatgctgcacttg
ccggggcgctatttcgacgagaactccaccggccatctcatcacgcgcgtcacctaccat
gtcgagcagatcaccggcgcggccaccaaggcgctgaccatcatcctgcgcgaaggcttc
ttcgtgctcggcctgctgggctatctgttctggaccaactggaagctgacactggtattc
atcgcggtcacgccgctgatcggctgggtggtcagctatgccagcaagcgcttccgcaag
ctctccaagcgtatccagggctcgatgggcgaggtgacccacgtggcctccgaggcgctg
tccggccatcgtgtcgtgcgtacccacggtgccgaggattacgagaaggcacgcttcgcg
gcggtcagtgagtacaaccgcgagcagaagatgaaggaagcgctgaccaaggccaccgcc
acgccggttatccagctgttgatcgccgtggcgctggccacgctggtatggctggcgatg
gcgccggaactgatggccggcatgagcgccggtgagttcgtcggcttcatcaccgccgcc
tcgatgatggccaagccggtgcgccagttgaccgaagtcaacggcgagatccagaagggc
atggcggcctcggaagaactgttcggtctgctggatacgccggcagagccggacaacggc
actttggtacccgagggtcgcctcgagggccgtgtgcgcttcgacaatgtccacttccgc
tatgcagaccatcagccggaggtgctcaagggcatcgatctggaggtgaagccggggcag
atggtcgccatcgtcgggcgttcggggtcgggcaagtcgacattgatgagcctgttgccg
cgcttctacgcaccgaccaccggccgcatcctgatcgacgatgtcgccatcgaggactac
aagctgcgcccgatgcgtcagcagatcgcgctggtctcgcagaatgtcaccctgttcaat
gccgacctgaccgccaacatcgcctatggcaccggtgaggtcgacaaggcacgggtggaa
gaggcggcgcgcgcggcctatgcccacgaattcatcgagcgcatgagcgaaggctacgac
accatcgtcggcgacaatggcgtgatgctctccggtggtcagcgccagcgtatcgccatc
gcgcgtgccatctacaaggactcgccgatcctggtgctggatgaggccacctcggcgctg
gataccgaatccgaacgctatatccagcgcgcgctggaggaagtgtgtcagggccggacg
accttcgtgatcgcccaccgtctgtccaccatcgagaaggcggaccgcatcctggtgatg
gatgatggcgagatcatcgaagacggcacccacgaatcattgattgctcaggaaggtgct
tatgccgcgctgcatcgcatccagttccgggagacggcagacgcatga
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