Halomonas sp. SF2003: C8233_14215
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Entry
C8233_14215 CDS
T05423
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
haf
Halomonas sp. SF2003
Pathway
haf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C8233_14215
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
haf02000
]
C8233_14215
02044 Secretion system [BR:
haf02044
]
C8233_14215
Transporters [BR:
haf02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
C8233_14215
Secretion system [BR:
haf02044
]
Type I secretion system
Adhesin protein transporter
C8233_14215
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
MMR_HSR1
AAA_29
Zeta_toxin
Peptidase_C39
Motif
Other DBs
NCBI-ProteinID:
AVV34646
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All DBs
Position
3431219..3433312
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AA seq
697 aa
AA seq
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MARYHGNPRSAAVLVDGLPMEEGRLPLALVSRAAARANLSAKLVNQQITAVSDMLMPCIL
ILKEERAVVLLEVDNDAGKARIHQPEAEGDELVDIESLAERHDGRVVYLKQEHRFDERAP
ETLKQSDGHWFWSTLKLSRPIYRDVILASILINLFAVASPLFVMNAYDKVVPNLAFNTLW
VLATGMAIIMVFDFVMRQTRAYFMDTAGKKSEVLLTSKLFSKTMNLRMEARPGSVGGYVK
HLQEFDSIREFFTSATLTTLVDLPFALLFLLVIWIVAGPLVLVPFAALVILLVYSLAIQK
PLRSSIEQGSRLATERNARLVEAVSGLESLKLANAQGETQRRYERAVGQIAHWGVKSRNL
TTSVSSLSMSLTQATTVALVVFGVYLIADARLSVGGLIAAVMLSGRALQPLGQLALLITR
IGQTRSAMSALEQIMALPEESEDRRYVHREHLQMRIEFDRVGFAYAPNTPPAVSDISLTI
NPGERIAIIGRIGAGKSTLQRLVSGLYRATAGSVRIDGLDLNQLHPADVRRHIGHAGQDS
SLFFGSIRDNITLGQPHASDVQVELAADASGVTEFTRHHPEGLDRQVGEGGRMLSSGQRQ
TVLLARALLMRPPLLLLDEPGSHMDNRAELRLRRMLKSLPRSQTLVLVTHKSSMLDVVDR
VIVMEGGRIVADGPKQQVLSDLNEGRVAGRKQEVNRG
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgttaccacggcaatcccagatctgcagcagtgctggtcgatggccttcccatg
gaggaaggccgtcttcccctggcgcttgtcagtcgtgccgcggcacgtgccaatctgagt
gccaaactggtcaaccagcagatcacggccgtcagcgacatgctgatgccgtgcattctc
atactcaaggaagagcgtgctgtcgtcttgctggaggtcgacaacgacgcaggcaaggcc
aggattcatcagcctgaggccgagggtgatgagctggtcgacatcgagtctctggctgag
cgtcatgatgggcgtgtcgtctatctcaagcaggagcaccgctttgatgaacgcgcaccg
gaaacgctcaagcagagcgatggccattggttctggtcaacgctgaagctgtcgcggccg
atctaccgtgatgtgattctggcgtcgatattgatcaacctgtttgccgtggcatcgcca
ctgttcgtgatgaacgcctatgacaaggtcgtgcccaatctggccttcaacacgctgtgg
gtcttggcgacgggcatggcgatcatcatggtgttcgacttcgtgatgcgccagacacgc
gcctacttcatggacacggccggcaagaagtccgaggtgttgctgacctcgaagctcttc
tccaagaccatgaacctgcggatggaagcgcgtcccggctctgtcggtggctatgtgaag
cacctgcaggagtttgattcgattcgagagttcttcacctccgcgaccctgaccaccctg
gtcgatctgccgtttgccctgctgttcctgctggtgatctggatcgtggcggggccattg
gttctggtgcccttcgccgcgctcgtgatcctgctcgtctacagtctggcgatccagaag
ccgctgcgcagcagcatcgagcaggggtcgcgcctggcgacggagcgcaatgcgcgcctc
gtcgaagcagtctccggcctcgagagcctcaagctggccaatgctcagggcgaaacccag
cgtcgatatgaacgcgccgtcgggcagatcgcgcattggggggtgaaaagccgcaacctg
acgacctctgtcagctctctgagcatgtcgctgacacaggccaccacggtggcgctggtc
gtgttcggggtctatctgatcgcggatgcacgcctgtctgtcggtggcttgatcgccgcg
gtcatgctgtccgggcgtgcgttgcagccgctggggcagttggcgttgctgatcacgcgc
atcggccagactcgcagtgccatgagtgcgcttgagcagatcatggcattgccggaagag
tcggaagatcgtcgttacgttcaccgcgagcatctgcagatgcgcatcgaattcgatcgc
gtcggctttgcctatgcgccgaatacgccgcctgccgtgtcggatatctcactgaccatc
aatccaggtgagaggatcgcgatcatcgggcgtatcggtgctggcaagagtaccttgcaa
cgtcttgtctctggcctgtatcgcgccacggcgggcagcgttcgaatcgatggactggat
ctcaatcagctgcatcccgccgacgtacgtcggcatatcggtcatgcgggccaggacagt
tcactgttcttcggctccattcgcgacaacatcaccctcggccaaccacacgccagtgac
gtacaggtcgaactcgcggctgatgcctccggtgtgactgaattcactcgccatcaccct
gaaggactggaccgtcaggtgggtgagggtgggcgcatgctctccagcggtcagcgtcag
acggtcttgctggcacgcgcactcttgatgcgtcccccgctcttgctgctcgatgagccc
gggtcgcacatggataaccgcgccgagctgcgcctgcgcagaatgctcaagtccctgcca
cgcagtcagacgctggtgctggtcacccacaagagcagcatgctcgacgtggtagaccgc
gtcatcgtcatggaaggggggcgcatcgtcgccgatgggcccaagcagcaggtgctgagc
gacctgaatgaaggccgtgtcgccgggcgcaagcaggaggtgaatcgtggctaa
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