Halomonas sp. SF2003: C8233_17865
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Entry
C8233_17865 CDS
T05423
Name
(GenBank) type I secretion system permease/ATPase
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
haf
Halomonas sp. SF2003
Pathway
haf02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
haf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C8233_17865
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
haf02000
]
C8233_17865
02044 Secretion system [BR:
haf02044
]
C8233_17865
Transporters [BR:
haf02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
C8233_17865
Secretion system [BR:
haf02044
]
Type I secretion system
Adhesin protein transporter
C8233_17865
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
Peptidase_C39
SMC_N
AAA_29
Zeta_toxin
AAA_28
Motif
Other DBs
NCBI-ProteinID:
AVV35246
LinkDB
All DBs
Position
complement(4319749..4322049)
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AA seq
766 aa
AA seq
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MSAPQTTASLATATSQPDPLLESVRQLLRLQGHGIDLERLRHGMPLTKGELAPQDLEQAL
SRQGIAARLSQAPLSEIPESLMPCVVLLEDGSSRVLLSHEAAHQWPDKSSSESSSKSGTD
TRSESGSDTSDTQAGDDLDITPSGPGYKLLDPLSGGAYWLPQAELAATYAGIALFAHGEI
SLERAEGYSQTQKGHWLTSRLKSHWRVFAEVALSSSLAALLAVATALFAMQVYDRVVPTG
AVDTLWALGIGVMLAIGLEALLRALRAQLIENSGKKIDLELNDHIFRHAVQMRLAAKPRS
TGAMASQIRDFDAIREFFTASTLGACGDLPFALLFLGLIALLGGPVVWVPVAAIVLMLIP
VLLAQPWLSRLSREGMRESAVKNGVLLETLDNLENLKACRAEGHASRQWQRLTSEQTHRG
VTFRHAVAWLTSWGTGMQQLAYVGVIIAGVYLIMAGELSVGALIACSILSSRAIGPTLQI
SALLSRWQHVKVAKEGLDALMETDIERPSDRRFARLAQARGHYQAENLHWRYDEEAPEAL
ALDRLSIAPGEHLALLGGNGAGKSTLLRLLAGYFTPTSGELTLDNLALSQIDPADRQRAI
GYLPQDISLFSGTLRDNLCIDGRDVSDMRLLEVIEMTGLGDFVRRHPLGLDMMLHDRHSL
SGGQRQSLGLARLVLQDPAVVLLDEPTASLDQATEQHVIKTLGPWLAGRTLVLATHRKSL
LGWVERALVLRHGKRVMDGPLDQIMARQSAGKTPATSASRQRQEAS
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccccacagaccaccgcctccttggccacggcgacatcgcaacccgacccattg
ctggagagcgttcgccagttgctgcgtctgcagggccacggcatcgatctcgagcgcctg
cgacacggcatgccactcaccaagggtgagctggcgccgcaggatctggagcaggccctg
tcgcgccagggcatcgccgcgcgtctgagtcaggcgccgctcagcgagatccccgaaagt
ctgatgccctgtgtcgtgctgctggaagacggcagcagtcgcgtgctgctgtcccatgag
gccgcgcatcagtggcctgacaagtcgagcagcgaatcgagcagtaagtcgggtaccgac
acgagaagtgagtcgggcagcgacacgagcgacacccaggcaggcgatgacttggacatc
acccccagcggccccggctacaagctgctcgatcccctgtccggtggcgcctactggctg
ccacaggccgaactggctgccacctacgccggcattgcgctgtttgcgcatggcgagatc
tcgctggagcgcgcggaaggctacagccagacccagaaggggcattggctgacctcacgg
ctcaagtcgcattggcgcgtcttcgccgaggtcgcgctttcctcctcgcttgccgccctg
ctggccgtggccacggccctgttcgcgatgcaggtctatgaccgggtggtgccgaccggc
gccgtcgatacgctgtgggcgctgggcatcggcgtgatgctcgccatcgggctggaagcc
ttgttgcgcgcattgcgggcgcagctgatcgagaactcgggcaagaagatcgacctcgaa
ctcaacgatcacatcttccgccacgccgtgcagatgcgcctggccgccaagccgcgctcg
accggggcgatggccagccagattcgtgacttcgacgccatccgtgaattcttcaccgcc
tcgaccctcggcgcctgtggtgacctgcccttcgcgttgttgttcctgggcctgatcgcc
ctgctgggtggcccggtggtctgggtgccggtggcggccatcgtgttgatgctgattccc
gtgctgctggcgcaaccatggctgtcgcggctgtcgcgtgaaggcatgcgcgaatcggcg
gtcaagaacggcgtgctgctcgagaccctcgacaacctcgagaacctcaaggcctgtcgc
gctgagggccatgccagccgtcagtggcagcgcctgacctccgagcagacgcaccgcggc
gtcaccttccgccacgccgtcgcctggctgaccagctggggcaccggcatgcagcagcta
gcctacgtcggcgtcatcatcgccggggtctacctgatcatggctggcgagttgagtgtc
ggtgccctgatcgcctgttcgattctctcgtcgcgcgccatcggcccgaccctgcagatc
agtgcgttgctgagtcgctggcagcacgtcaaggtcgccaaggaagggttggatgcactg
atggagactgacatcgagcgccccagcgatcgtcgcttcgcgcgcctcgcccaggcacgc
ggtcactaccaggccgagaatctgcactggcgctacgacgaggaggccccggaagccctg
gcactggaccgcctgagcatcgcacccggtgagcacctcgccctgctggggggcaacggc
gccggcaagagcaccctgctgcgtctgctggccggctacttcacgcccaccagtggcgag
ctgaccctcgacaacctcgccctgagtcagatcgaccctgccgaccgccagcgggccatc
ggctatctgccgcaggacatcagcctgttcagcggcacgctgcgcgacaacctgtgcatc
gacgggcgggatgtcagcgacatgcgcctgctggaggtcatcgagatgaccggactgggc
gacttcgtacgccgccacccgctggggctggacatgatgctgcatgatcgccacagcctg
tccggtggccagcgccagagcctcggccttgcccgcctggtcctgcaggacccggccgtc
gtgctgctggatgagcccaccgcctcgctggatcaggccaccgagcaacacgtcatcaag
accctcggcccctggcttgccggccgcaccctggtgctggccacacaccgcaagtcactg
ctcggctgggtcgaacgcgccctggtgctgcgccacggcaagcgcgtcatggacggcccg
ctggatcagatcatggccagacaatcggccggcaagacaccggccacctccgcatcccgt
cagcgccaggaggcctcatga
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