KEGG   Halomonas sp. GFAJ-1: BB497_13480
Entry
BB497_13480       CDS       T05375                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
hag  Halomonas sp. GFAJ-1
Pathway
hag03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:hag00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    BB497_13480
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hag03400]
    BB497_13480
Enzymes [BR:hag01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     BB497_13480
DNA repair and recombination proteins [BR:hag03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     BB497_13480
 Prokaryotic type
     BB497_13480
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AVI63645
UniProt: H0IYS5
LinkDB
Position
complement(2995728..2996411)
AA seq 227 aa
MSSPLPNDWHQWLGQEFQADYMKTLKHFLAQEKAAKKVIYPHSTNWFRAFELTPLSEVKV
VILGQDPYHGPNQAHGLCFSVQPGIQVPPSLVNIYKELASDVGFTPVRHGFLEHWARQGV
LLLNTALTVEQGNAASHRGKGWEPFTDRAIETVNQHADPCVFLLWGSHARQKKSLIDQGR
HLVLESPHPSPLSAHRGFFGNQHFSRSNQFLIDNGRSPIAWQLPETP
NT seq 684 nt   +upstreamnt  +downstreamnt
atgtctagccccttacctaacgactggcatcaatggcttgggcaagagttccaggctgac
tacatgaagactttgaagcactttttggctcaggaaaaagcggccaagaaagttatctac
ccacactcaaccaattggtttagagcatttgaactgacgccgttgagtgaggttaaggtc
gttatattggggcaggacccctaccatgggcctaatcaggcccatgggctctgtttttct
gtacagcctggtattcaggtgccgccgtcactggtaaatatctataaagagttggccagt
gatgttggttttacgccggttcgccatgggtttctagagcattgggccaggcagggtgtg
ctgcttttgaacacagcgctaaccgttgagcagggcaatgcggcatctcatcgggggaag
gggtgggaaccttttaccgaccgcgccattgaaaccgtcaatcaacatgctgacccctgt
gttttcttgctttggggtagccatgcacgccaaaaaaaatccctgattgatcaagggcgg
catttagtgctggagtccccgcacccatcgccgttatcagcacatcgggggttctttggt
aatcagcacttttcccgttctaaccaattcttgatagataacgggcgctcgccgattgcg
tggcaattgccggaaaccccttaa

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