Hipposideros armiger (great roundleaf bat): 109382395
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Entry
109382395 CDS
T04661
Symbol
COL5A1
Name
(RefSeq) collagen alpha-1(V) chain
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
hai
Hipposideros armiger (great roundleaf bat)
Pathway
hai04820
Cytoskeleton in muscle cells
hai04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
hai00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109382395 (COL5A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
109382395 (COL5A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
hai00536
]
109382395 (COL5A1)
Glycosaminoglycan binding proteins [BR:
hai00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109382395 (COL5A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_1
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
109382395
NCBI-ProteinID:
XP_019497388
UniProt:
A0A8B7RB41
LinkDB
All DBs
Position
Unknown
AA seq
1722 aa
AA seq
DB search
MGVAHLEAKTGIAPQLYWTSRNLAQPADLLKVLDFHNLPDGIAKTAGFCTTRRSSKGPDV
AYRVTKDAQLSAPTKQLYPASAFPEDFSILTTVKAKKGSQAFLVSIYNEQGIQQIGLEMG
RSPVFLYEDHTGKPGPEDYPLFRGINLSDGKWHRIALSVHKKNVTLILDCKKKATKFLNR
SDHPIIDVNGIIVFGTRILDEEVFEGDIQQLLFVSDHRAAYDYCEHYSPDCDTAVPDTPQ
SQDPNPDEYYPEGEGEGETYYYEYPYYEDTDDPSKEPAPTKKPVEAARETTEVAEELTPP
PTAAPPVPNTGEGAGKEEDLGIGDYDYVPSEDYYTPPPYEDLSYIEGIEDPDQLPDHDAG
PGVPTSTAGTSNASNPAPPPGEGKDDLEGEFTEETIKNLDENYYDPYYDPTVSPSEIGPG
MPANQDTIFEGIDGPRGEKGQKGEPAIIEPGMLLEGPPGPEGPAGLPGPPGTMGPTGQVG
DPGERGPPGRPGLPGADGLPGPPGTMLMLPFRFGGGGDAGSKGPMVSAQESQAQAILQQA
RLALRGPAGPMGLTGRPGPVGPPGNGGLKGDPGDMGPQGPRGVQGPPGPTGKPGRRGRAG
SDGARGMPGQTGPKGDRGFDGLAGLPGEKGHRGDPGPSGPPGPPGDDGDRGDDGEVGPRG
LPGEPGPRGLLGPKGPPGPPGPPGVTGMDGQTGPKGSIGPQGEPGPPGQQGNPGAQGLPG
PQGAIGPPGEKGPLGKPGLPGMPGADGPPGHPGKEGPPGEKGGQGPPGPQGPIGYPGPRG
VKGADGIRGLKGTKGEKGEDGFPGFKGDMGIKGDRGEIGPPGPRGEDGPEGPKGRGGPNG
DPGPLGPSGEKGKLGVPGLPGYPGRQGPKGSSGYPGFPGANGEKGGRGTPGKPGPRGQRG
PTGPRGERGPRGITGKSGPKGNSGGDGPAGPPGERGPNGPQGPTGFPGPKGPPGPPGKDG
LPGHPGQRGETGFQGKTGPPGPPGVVGPQGPTGETGPMGERGHPGPPGPPGEQGLPGLAG
KEGTKGDPGPAGLPGKDGPPGLRGFPGDRGLPGPVGALGLKGSEGPPGPPGPAGSPGERG
PAGAAGPIGIPGRPGPQGPPGPAGEKGAPGLPGPPGEKGETGDVGQMGPPGPPGPRGPSG
APGADGPQGPPGGIGNPGAVGEKGEPGEAGEPGLPGEGGPLGEKGPQGPAGRDGLQGPVG
LPGPAGPVGPPGEDGDKGEIGEPGQKGSKGDKGEQPSPATPSRSRLRLLNPVFSLWHQGS
PGPTGEPGPSGPPGKRGPPGPAGPEGRQGEKGAKGPKGERGEKGEAGPSGAAGPPGPKGP
PGDDGPKGSPGEQGLPGSPGPDGPPGPMGPPGLPGLKGDSGPKGEKGHPGLIGLIGPPGE
QGEKGDRGLPGPQGSSGPKGEQGITGPSGPLGPPGPPGLPGPPGPKGAKGSSGPTGPKGE
AGHPGLPGPPGPPGEVIQPLPIQASRTRRNIDASQLLDDGDGENYMDYADGMEEIFGSLN
SLKLEIEQMKRPLGTQENPARTCKDLQLCHPDFPDGEYWVDPNQGCSKDSFKVYCNFTAG
GATCVFPDKKSEGSKMARWPKEQPSTWYSQYKRGSLLSYVDAEGNPVGVVQMTFLRLLSA
SANQNITYNCYQSVAWQDAATGSYDKAMRFLGSNDEEMSYDNSPYIRALVDGCATRKGYQ
KTVLEIDTPRVEQVPIVDIMFNDFGEAAQKFGFEVGPACFLG
NT seq
5169 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtggctcacctagaggccaagaccggtattgcaccccagctctactggacatcg
agaaatctggctcaaccagcagatctcctgaaggttctagattttcacaacttgcctgat
ggaatagccaagacagcaggtttttgcacaacgcggcgatcttccaaaggcccagatgtc
gcttacagggtcacgaaagatgctcagctcagtgcacccaccaagcagctgtaccccgca
tctgcgtttcccgaggacttctccattctaaccactgtgaaagccaagaagggcagccag
gccttcctggtgtccatctacaacgagcagggtatccagcagatcggcctggagatgggc
cgctcgcctgtcttcctctatgaggaccacacgggaaaaccgggcccagaagactacccc
ctcttcaggggcatcaacctgtcagatggcaagtggcacagaattgcactcagcgtccac
aagaaaaatgtcaccttgatcctggactgtaaaaagaaggccactaaattcctcaaccgc
agcgaccaccccattatagatgtcaatggcatcattgtgtttggcacccggattctggac
gaggaagtgtttgagggtgacatccagcagctgttgttcgtgtcggaccaccgggcagct
tacgattactgcgagcactatagccccgactgtgacactgccgtccccgacaccccccag
tctcaggaccccaacccagatgaatattacccggaaggcgagggggaaggcgagacctat
tactacgagtacccctactacgaggacacggacgacccaagcaaggagcccgcacccacc
aagaagcctgtggaagctgctagagagaccacggaggtggccgaggagctgacgccgccg
cccacggcagcccctccggtgcccaacactggcgagggggccgggaaggaggaggacctt
ggcataggggactatgactacgtgcccagcgaggactactacacgccgcccccttacgag
gacctcagctatatcgagggcatcgaggaccccgaccagctccccgaccatgacgcaggg
cccggggtgcccaccagcacggcggggacctccaacgcctccaacccggctccgcctccg
ggggaggggaaggatgacctggagggggagttcaccgaagagaccatcaagaacctggat
gagaactactacgacccttactacgaccccaccgtctccccatcggagatcgggccgggc
atgccggccaaccaggacaccatcttcgaagggattgatggaccacggggcgagaaaggt
caaaaaggagaacccgccatcattgaaccaggcatgctgttggaggggccacccggccct
gaaggccccgcaggtcttccaggacctccaggaacgatgggtcccactggccaagtgggt
gaccccggagaaaggggtccccctggacgcccaggtcttcctggggccgatgggctgcct
ggcccccctggaaccatgctcatgctgcctttccggtttggagggggtggtgatgccgga
tccaaaggccccatggtctcagcccaggagtcccaagctcaagccattctgcagcaggcc
cggttggcgttgaggggaccagctggcccaatgggtcttactgggagacccggccctgtg
ggccctcccgggaacggaggtttgaagggcgatccgggagacatgggccctcagggtccc
cgaggtgtgcagggcccgcccggccccacaggaaagcctgggagaagggggcgggctggc
agtgacggagcaagagggatgcctggacagactggccccaagggtgaccgcggtttcgat
ggcctggctgggctgccgggagagaagggccacaggggtgaccctggtccttctggcccg
ccgggacctccgggagacgacggagacaggggtgacgacggagaagttgggcccagaggg
ctgcctggggaacctgggccacgtggtctgctggggccaaagggtcccccgggcccgcct
ggacctcccggcgtgacgggtatggacggccaaacaggcccaaaaggaagcatcggtccc
cagggagagcccggccccccaggacaacagggcaatccaggagcccagggtcttccaggg
ccccagggtgcaatcggtcctccaggagaaaagggtcccctgggtaagccaggcctccca
ggaatgcccggcgctgatggacccccagggcaccctggcaaagaaggccctccgggagag
aagggaggccagggtccacctggtccccagggcccgatcggctaccctggacctcgagga
gtcaagggggcagatggcatccgtggtctgaagggtaccaagggcgagaagggggaagac
ggctttcccgggtttaaaggagacatgggcatcaaaggcgatcggggtgagattggccca
cctggtcccagaggggaagatggccccgaaggcccgaaaggtcgcggaggtccgaacggt
gacccaggtcctctgggaccctcaggggagaagggaaaactcggcgtcccagggctgccg
ggctacccaggaagacaagggccaaagggctcgagtggatatcctggatttcctggtgcc
aacggagagaaaggcggcaggggcacacctgggaagccgggaccacggggacagcgcggc
ccgacgggtccacggggcgaaagaggcccccggggcatcaccgggaagtcgggccccaag
ggcaactctggaggtgatggcccggccggcccgccaggtgaacggggacccaatggaccc
caaggacccacgggctttcctggaccaaagggcccccctggccccccaggcaaggatggg
cttccaggacaccctggtcagagaggcgagaccggattccaaggcaagaccggcccccca
ggtcctccaggcgtggtcggcccgcagggccccacaggagaaactggtccaatgggtgag
cgtggccaccctgggcccccgggccccccaggtgaacaggggctcccgggccttgctggg
aaagaagggacgaagggtgacccaggccccgccggcctccctgggaaagacggccctcca
ggattacgcggctttcctggggaccgagggctccctggtccagtgggagcgcttggactg
aaaggcagcgaaggccctccaggcccacccggccccgcgggatctccgggggagagaggt
ccggccggtgccgctgggcccatcggaattccagggagacctgggcctcagggacctcca
gggccggcgggagagaagggagctcctggtctgccgggacctccaggagagaagggcgag
acgggggacgtgggtcagatgggccctccaggtccccctggcccccgaggaccctctgga
gctccaggtgccgatgggccacaaggtcccccaggtggaataggcaaccctggtgcagtg
ggagagaagggtgagcctggtgaagctggagaacctggccttcctggagaagggggcccc
ctgggcgagaaagggccacaaggcccagctggtcgagacggtctccagggtcctgtgggg
ctccccggcccggctggccctgtgggcccccctggagaagatggagataagggagagatc
ggggagccgggacagaaggggagcaagggggacaaaggagaacagcccagtcctgccaca
ccttcacggagcagactccgactcctaaatcctgtgttctctctctggcaccagggatcg
ccgggccccactggtgaaccaggtccgtctggacctccaggaaaaaggggtccccccggg
cccgcaggccctgaaggcagacaaggagagaaaggagccaagggacccaaaggagaaagg
ggagagaagggcgaagccggcccctctggtgctgcaggaccccctggacccaaagggcct
cccggagatgacggtcccaaaggcagccctggtgaacaaggtctcccgggatccccaggc
cccgatggcccccccggccccatgggtcccccaggactccccggcctcaaaggagattct
ggccccaaaggggaaaagggtcatccaggtctgatcggcctcattggccctccgggtgaa
cagggtgaaaagggtgaccgcggactccccgggccccagggctcctccggccctaaggga
gaacagggcatcactggtccttccggcccgctcggccccccgggcccccccggcttgccg
ggtcctcctggtccgaaaggtgctaagggctcctcgggtccaactggcccgaagggtgag
gcaggccatcccggactccccggcccaccgggccccccaggcgaggtcatccagcccctg
cccatccaagcgtccaggacgaggaggaacatcgacgccagccagctgctggacgacggg
gacggcgagaactacatggactacgcggacggcatggaggagatcttcggctcgctcaac
tccctgaagctggagatcgagcagatgaagcgaccgctgggcacgcaggagaaccctgcg
cgcacctgcaaggacctgcagctgtgccaccccgacttcccggatggcgaatactgggtg
gatccaaaccaaggctgctccaaggactctttcaaagtttactgcaacttcacagccgga
ggggccacgtgcgtcttccccgacaagaaatctgaggggagtaaaatggcccgctggccc
aaagagcagccttctacctggtatagtcagtacaagcgagggtccctgctctcctacgtg
gacgccgagggcaaccccgtgggcgtggtccagatgaccttcctgcgtctgctgagcgcc
tctgccaaccagaacatcacctacaactgctaccagtcggtcgcctggcaggacgccgcc
acgggcagctacgacaaggccatgcgcttcctgggctctaatgatgaggagatgtcctat
gacaacagcccctacatccgcgccctggtggacggctgtgccacgaggaaaggctatcag
aagacggtgctggagatcgacacgcccagggtggagcaggtgcccatcgtggacatcatg
ttcaacgacttcggggaagccgcacagaaattcggatttgaagtggggccggcttgtttc
ctgggctag
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integrated database retrieval system
