Haloplanus rubicundus CBA1113: DU500_09730
Help
Entry
DU500_09730 CDS
T05613
Name
(GenBank) transcription elongation factor Spt5
KO
K15172
transcription elongation factor SPT5
Organism
haj
Haloplanus rubicundus CBA1113
Pathway
haj03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
haj00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
DU500_09730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
haj03021
]
DU500_09730
03019 Messenger RNA biogenesis [BR:
haj03019
]
DU500_09730
Transcription machinery [BR:
haj03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
DU500_09730
RNA polymerase I system
DU500_09730
Messenger RNA biogenesis [BR:
haj03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
DU500_09730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
DUF6093
Glyco_hydro_65C
Motif
Other DBs
NCBI-ProteinID:
AXG06686
UniProt:
A0A345E3B4
LinkDB
All DBs
Position
1937440..1937877
Genome browser
AA seq
145 aa
AA seq
DB search
MGIFAVKTTASQERTVADMIASREEDEVHAVLAPDSLTSYVMVEADNSAVLERVMDEIPH
ARSIVPGTSSLTEVEHFLSPTPDVEGIAESDIVELIAGPFKGEKARVQRIDEGKDQVTVE
LYEATVPIPVTVRGDQIRVLDSDER
NT seq
438 nt
NT seq
+upstream
nt +downstream
nt
atgggcatcttcgccgtcaagaccacggccagtcaggagcgcaccgtcgcggacatgatc
gccagccgtgaggaagacgaggtacacgccgtcctcgcgcccgactcgctcacgagctac
gtgatggtcgaggcggacaacagcgccgtcctcgaacgcgtgatggacgagatccctcac
gcccgctccatcgtccccggcacctcctcgctgaccgaggtggaacacttcctgtcgccg
acgccggacgtggagggcatcgcggagagcgacatcgtcgaactcatcgccggcccgttc
aaaggcgagaaggcccgcgtccagcgtatcgacgagggcaaggatcaggtgaccgtcgaa
ctgtacgaggcgaccgttccgattccggtgacggttcgtggcgaccagatccgcgtgctc
gacagcgacgagcgatag
DBGET
integrated database retrieval system
